RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 RASD2Q96D21 266 aa12.66□□□□□ -0.38
VAMP2-201ENST00000316509 SMIM19Q96E16 107 aa12.66□□□□□ -0.38
VAMP2-201ENST00000316509 UBL7Q96S82 380 aaPredicted RBP12.66□□□□□ -0.38
VAMP2-201ENST00000316509 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.66□□□□□ -0.384e-7■□□□□ 9.4
VAMP2-201ENST00000316509 RXFP3Q9NSD7 469 aa12.66□□□□□ -0.38
VAMP2-201ENST00000316509 NCDNQ9UBB6 729 aa12.66□□□□□ -0.38
VAMP2-201ENST00000316509 ADAMTS20P59510 1910 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 TMED7-TICAM2A0A0A6YYA0 188 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 ANKUB1A6NFN9 424 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 E9PI62 339 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 PHYHO14832 338 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 LRRTM2O43300 516 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 TMCC2O75069 709 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 NUDT14O95848 222 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 ACSM3Q53FZ2 586 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 CPEB2Q7Z5Q1 589 aaKnown RBP12.65□□□□□ -0.38
VAMP2-201ENST00000316509 CADM3Q8N126 398 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 SLC38A9Q8NBW4 561 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 LSM14AQ8ND56 463 aaKnown RBP12.65□□□□□ -0.38
VAMP2-201ENST00000316509 MAFAQ8NHW3 353 aaPredicted RBP12.65□□□□□ -0.38
VAMP2-201ENST00000316509 IFI44Q8TCB0 444 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 RPS4Y2Q8TD47 263 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 RNF138Q8WVD3 245 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 GHSRQ92847 366 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 PELI1Q96FA3 418 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 DEPDC7Q96QD5 511 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 DCLRE1CQ96SD1 692 aaKnown RBP12.65□□□□□ -0.38
VAMP2-201ENST00000316509 RTN4RQ9BZR6 473 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 WDR54Q9H977 334 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 POLE4Q9NR33 117 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 TMED7Q9Y3B3 224 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 TMEM14AQ9Y6G1 99 aa12.65□□□□□ -0.38
VAMP2-201ENST00000316509 CPNE3O75131 537 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 ZFAND5O76080 213 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 IL7P13232 177 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 TMED10P49755 219 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 E2F1Q01094 437 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 SLC3A1Q07837 685 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 PAPD4Q6PIY7 484 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 UNQ9370/PRO34162Q6UXP9 181 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 ADGRG3Q86Y34 549 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 OR5J2Q8NH18 312 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 GFM1Q96RP9 751 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 RNF32Q9H0A6 362 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 ZCCHC4Q9H5U6 513 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 COMMD3Q9UBI1 195 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 TNRC6BQ9UPQ9 1833 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 SUSD5O60279 629 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 CFIP05156 583 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 SYPP08247 313 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 APOBEC1P41238 236 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 RPS5P46782 204 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 DAB2P98082 770 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 ASAH1Q13510 395 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 CCBE1Q6UXH8 406 aaPredicted RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 SSX6Q7RTT6 188 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 C1orf210Q8IVY1 113 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 DUSP19Q8WTR2 217 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 HGDQ93099 445 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 PPP1R3EQ9H7J1 279 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 PRDM6Q9NQX0 595 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 INIPQ9NRY2 104 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 NPAP1Q9NZP6 1156 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 ZNF346Q9UL40 294 aaKnown RBP12.64□□□□□ -0.39
VAMP2-201ENST00000316509 SPTBP11277 2137 aa12.64□□□□□ -0.39
VAMP2-201ENST00000316509 GON4LQ3T8J9 2241 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 KNL1Q8NG31 2342 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 SHISA3A0PJX4 238 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 AHSA1O95433 338 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 IGHMP01871 453 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 SHC1P29353 583 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 GDI2P50395 445 aaKnown RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TP53I3Q53FA7 332 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 ZNF684Q5T5D7 378 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 EEF1A1P5Q5VTE0 462 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 DESI1Q6ICB0 168 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 MRPL14Q6P1L8 145 aaKnown RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 SLC23A3Q6PIS1 610 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 OR6K6Q8NGW6 343 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 HTRA1Q92743 480 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TXNDC15Q96J42 360 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TSPAN32Q96QS1 320 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 MARCH7Q9H992 704 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 RPRD1BQ9NQG5 326 aaKnown RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TAS2R5Q9NYW4 299 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 RABL2AQ9UBK7 228 aaPredicted RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 FBXO4Q9UKT5 387 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 RABL2BQ9UNT1 228 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 FKBP7Q9Y680 259 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 UNC80Q8N2C7 3258 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TMEM72A0PK05 275 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 NTN3O00634 580 aaPredicted RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 ADAM10O14672 748 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 SCO2O43819 266 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TIAF1O95411 115 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms