RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 C17orf67Q0P5P2 114 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 LINC01590Q5TEZ4 76 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 LYSMD2Q8IV50 215 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 LAX1Q8IWV1 398 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 NLGN4YQ8NFZ3 816 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-201ENST00000315286 NEIL3Q8TAT5 605 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 ASB15Q8WXK1 588 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 RELTQ969Z4 430 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 SLC25A36Q96CQ1 311 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 TSPAN32Q96QS1 320 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 ARRDC1-AS1Q9H2J1 176 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 POLE4Q9NR33 117 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 TAS2R5Q9NYW4 299 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 MYOTQ9UBF9 498 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 GRHPRQ9UBQ7 328 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 PCDHGB6Q9Y5F9 930 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 GLCEO94923 617 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 LDOC1O95751 146 aaPredicted RBP16.64■□□□□ 0.25
CCDC43-201ENST00000315286 KLK3P07288 261 aaPredicted RBP16.64■□□□□ 0.25
CCDC43-201ENST00000315286 NAGAP17050 411 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 GALP22466 123 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 SLC3A1Q07837 685 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 IL10RAQ13651 578 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 ZNF181Q2M3W8 571 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 TP53I3Q53FA7 332 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 BICRALQ6AI39 1079 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 EXD3Q8N9H8 876 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 MR1Q95460 341 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 NPAS1Q99742 590 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 CCDC86Q9H6F5 360 aaKnown RBP16.64■□□□□ 0.25
CCDC43-201ENST00000315286 WDR54Q9H977 334 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 ZNF346Q9UL40 294 aaKnown RBP16.64■□□□□ 0.25
CCDC43-201ENST00000315286 POLHQ9Y253 713 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 GRIP1Q9Y3R0 1128 aa16.64■□□□□ 0.25
CCDC43-201ENST00000315286 TEX51A0A1B0GUA7 166 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 RGS9O75916 674 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-201ENST00000315286 TGM1P22735 817 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 MPLP40238 635 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 DNASE1L3Q13609 305 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 MESTQ5EB52 335 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 STEAP3Q658P3 488 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 ALG12Q9BV10 488 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 OR11A1Q9GZK7 315 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 TBCCD1Q9NVR7 557 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 MED11Q9P086 117 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 GPN3Q9UHW5 284 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-201ENST00000315286 COPS3Q9UNS2 423 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 CMAHPQ9Y471 501 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 PCDHGB7Q9Y5F8 929 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 GPR179Q6PRD1 2367 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 A8MVM7 634 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 CBFA2T3O75081 653 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 OR2J2O76002 312 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 SLC25A1P53007 311 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 TAS2R43P59537 309 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 EMC4Q5J8M3 183 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 C1orf140Q5VVS0 124 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 LYPD8Q6UX82 237 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 PLEKHG7Q6ZR37 379 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 MAMDC2Q7Z304 686 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-201ENST00000315286 SDHCQ99643 169 aaPredicted RBP16.63■□□□□ 0.25
CCDC43-201ENST00000315286 ULBP3Q9BZM4 244 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 MARCH7Q9H992 704 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 ABCB9Q9NP78 766 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 NXT1Q9UKK6 140 aaKnown RBP16.63■□□□□ 0.25
CCDC43-201ENST00000315286 UGT2A1Q9Y4X1 527 aa16.63■□□□□ 0.25
CCDC43-201ENST00000315286 CPAMD8Q8IZJ3 1885 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 ANKUB1A6NFN9 424 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 C11orf98E9PRG8 122 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 H7C1C5 153 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 DCTN6O00399 190 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 NCR1O76036 304 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 MT-ATP6P00846 226 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 CYC1P08574 325 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 ACVR1BP36896 505 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 LCN6P62502 163 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 KRR1Q13601 381 aaKnown RBP16.62■□□□□ 0.25
CCDC43-201ENST00000315286 FAM69AQ5T7M9 428 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 DMKNQ6E0U4 476 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-201ENST00000315286 SLC22A16Q86VW1 577 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 ZNF511Q8NB15 262 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 RNF138Q8WVD3 245 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 TTC9Q92623 222 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 WDFY2Q96P53 400 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 MIXL1Q9H2W2 232 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 SRA1Q9HD15 236 aaKnown RBP16.62■□□□□ 0.25
CCDC43-201ENST00000315286 RALGAPA1Q6GYQ0 2036 aa16.62■□□□□ 0.25
CCDC43-201ENST00000315286 SLC35F4A4IF30 521 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 LOC110117498-PIK3R3F6TDL0 507 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 PRKCAP17252 672 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 CD53P19397 219 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ACP1P24666 158 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 PCOLCEQ15113 449 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 CDONQ4KMG0 1287 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 FAM198BQ6UWH4 519 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 DBX2Q6ZNG2 339 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 SYS1Q8N2H4 156 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 RHBDD1Q8TEB9 315 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 SNX33Q8WV41 574 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 TMEM234Q8WY98 164 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms