RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 FAM230AA0A1W2PPH8 454 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 TMEM82A0PJX8 343 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 ASPDHA6ND91 283 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 BPNT1O95861 308 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 GABRR1P24046 479 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 FOLR3P41439 243 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 CDKN3Q16667 212 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 PYCR3Q53H96 274 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 ABHD17BQ5VST6 288 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 ZNF585AQ6P3V2 769 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 OR5H6Q8NGV6 325 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 TEAD3Q99594 435 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 MAP3K3Q99759 626 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 ZNF225Q9UK10 706 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 H3BNC9 293 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 CNOT4O95628 575 aaKnown RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 SORDQ00796 357 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 YIF1BQ5BJH7 314 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 MANEAQ5SRI9 462 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SLC7A6Q92536 515 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SLC35A4Q96G79 324 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SLC46A1Q96NT5 459 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SDF2Q99470 211 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SPIN2AQ99865 258 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SPIN2BQ9BPZ2 258 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 NXF5Q9H1B4 397 aaKnown RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 OR52A5Q9H2C5 316 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SPHK1Q9NYA1 384 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 TBC1D29Q9UFV1 150 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 MARF1Q9Y4F3 1742 aaKnown RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 TRAV36DV7A0A075B6V5 113 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 hCG_1807616A0A1W2PRN6 198 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 NUDT21O43809 227 aaKnown RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 HOXB9P17482 250 aaPredicted RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 HTR2CP28335 458 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 FAPQ12884 760 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 AQP6Q13520 282 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 UNQ6126/PRO20091Q6UXV3 157 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 CMIPQ8IY22 773 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SENP5Q96HI0 755 aaPredicted RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 NCDNQ9UBB6 729 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 C19orf53Q9UNZ5 99 aaPredicted RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 CORINQ9Y5Q5 1042 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 F5P12259 2224 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 IFNA1P01562 189 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SBK2P0C263 348 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 GPLD1P80108 840 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 B4GALNT1Q00973 533 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 ALKBH1Q13686 389 aaKnown RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 NKG7Q16617 165 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 DUSP6Q16828 381 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 C5orf46Q6UWT4 87 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 ZNF620Q6ZNG0 422 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SLC2A12Q8TD20 617 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 RASD2Q96D21 266 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 YIPF6Q96EC8 236 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 RHNO1Q9BSD3 238 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 SAV1Q9H4B6 383 aaPredicted RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 HINT3Q9NQE9 182 aaKnown RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 KCNIP1Q9NZI2 227 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 ATP1B1P05026 303 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 PTBP1P26599 531 aaKnown RBP eCLIP12.73□□□□□ -0.377e-8■■■□□ 17.8
SPAST-201ENST00000315285 VEGFCP49767 419 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 KIAA1024LP59773 190 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 UBE2NP61088 152 aaKnown RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 IDO2Q6ZQW0 420 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 BOLLQ8N9W6 283 aaKnown RBP12.73□□□□□ -0.37
SPAST-201ENST00000315285 FAM174AQ8TBP5 190 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 ZNF649Q9BS31 505 aa12.73□□□□□ -0.37
SPAST-201ENST00000315285 LCMT2O60294 686 aaKnown RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 ADAM23O75077 832 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 BSGP35613 385 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 TNK1Q13470 666 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 KRBOX4Q5JUW0 171 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 MRPL21Q7Z2W9 205 aaKnown RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 OR13H1Q8NG92 308 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 OR13C9Q8NGT0 318 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 UNKLQ9H9P5 680 aaKnown RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 DHCR7Q9UBM7 475 aaKnown RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 TTC3P53804 2025 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 TRABD2BA6NFA1 517 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 THBS1P07996 1170 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 CD1EP15812 388 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 CPEP16870 476 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 EIF2S3P41091 472 aaKnown RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 CCR6P51684 374 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 ZNF695Q8IW36 515 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 SULF2Q8IWU5 870 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 CMTM1Q8IZ96 169 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 OR6F1Q8NGZ6 308 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 SMAP2Q8WU79 429 aaPredicted RBP12.72□□□□□ -0.37
SPAST-201ENST00000315285 Q96M85 177 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 LIN7BQ9HAP6 207 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 MICAL3Q7RTP6 2002 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 TMED7-TICAM2A0A0A6YYA0 188 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 SERPINA2P20848 420 aa12.72□□□□□ -0.37
SPAST-201ENST00000315285 DDOSTP39656 456 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms