RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLCO1B1Q9Y6L6 691 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 C2orf72A6NCS6 295 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 C17orf51A8MQB3 221 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 M0R036 132 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 GMDSO60547 372 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 RECKO95980 971 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 TPOP07202 933 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 UGT2B7P16662 529 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 CFL1P23528 166 aaKnown RBP11.67□□□□□ -0.54
RETREG3-201ENST00000309428 RBMS1P29558 406 aaKnown RBP11.67□□□□□ -0.54
RETREG3-201ENST00000309428 CCKBRP32239 447 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 OR1D4P47884 311 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 AGFG1P52594 562 aaKnown RBP11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ART1P52961 327 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 S100A10P60903 97 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 BTG2P78543 158 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 PDE7AQ13946 482 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 CD276Q5ZPR3 534 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 NAXEQ8NCW5 288 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 TMEM52Q8NDY8 209 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 OR5M1Q8NGP8 315 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 OR4Q3Q8NH05 313 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 HAVCR2Q8TDQ0 301 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 LRRC46Q96FV0 321 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 CMKLR1Q99788 373 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 SLC38A1Q9H2H9 487 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 SIDT1Q9NXL6 827 aaKnown RBP11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ERVK-19Q9WJR5 959 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 CBX7O95931 251 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 PEBP1P30086 187 aaKnown RBP11.67□□□□□ -0.54
RETREG3-201ENST00000309428 DEFB133Q30KQ1 61 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ALG10BQ5I7T1 473 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 SLC48A1Q6P1K1 146 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 GDF7Q7Z4P5 450 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 ZSCAN1Q8NBB4 408 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 OR52R1Q8NGF1 315 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 THAP6Q8TBB0 222 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 RAB7BQ96AH8 199 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 PINK1Q9BXM7 581 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 COMMD4Q9H0A8 199 aa11.67□□□□□ -0.54
RETREG3-201ENST00000309428 LOC105371267A0A1B0GV96 52 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ATG12O94817 140 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 UBL3O95164 117 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ACHEP22303 614 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 NUDT1P36639 197 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 DUSP6Q16828 381 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 DMRTC1Q5HYR2 192 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 LMX1AQ8TE12 382 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 FAM46BQ96A09 425 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 RNF170Q96K19 258 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 PELI2Q9HAT8 420 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 MKKSQ9NPJ1 570 aaPredicted RBP11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ING1Q9UK53 422 aaPredicted RBP11.66□□□□□ -0.54
RETREG3-201ENST00000309428 CA14Q9ULX7 337 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ASB4Q9Y574 426 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 SHISA3A0PJX4 238 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 TXNL1O43396 289 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ADH1BP00325 375 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 F3P13726 295 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 SLC6A6P31641 620 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 S100A11P31949 105 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 GRK6P43250 576 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 DNASE1L1P49184 302 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
RETREG3-201ENST00000309428 LUMP51884 338 aaPredicted RBP11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ARFIP1P53367 373 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 TAS2R43P59537 309 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 DPTQ07507 201 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 MELKQ14680 651 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 TMEM52BQ4KMG9 183 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ADAMTSL4Q6UY14 1074 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 Q6ZTK2 550 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 TEX19Q8NA77 164 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 PHOSPHO1Q8TCT1 267 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 BRIX1Q8TDN6 353 aaKnown RBP11.66□□□□□ -0.54
RETREG3-201ENST00000309428 TAPBPLQ9BX59 468 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ACTRT3Q9BYD9 372 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 NPIPB8E9PQR5 432 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 ATF1P18846 271 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 HHEXQ03014 270 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 EEF1A2Q05639 463 aaKnown RBP11.66□□□□□ -0.54
RETREG3-201ENST00000309428 FUT5Q11128 374 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 C12orf73Q69YU5 71 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 SSX6Q7RTT6 188 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 VN1R4Q7Z5H5 301 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 SLC37A2Q8TED4 501 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 SENP5Q96HI0 755 aaPredicted RBP11.66□□□□□ -0.54
RETREG3-201ENST00000309428 PTDSS2Q9BVG9 487 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 CRISPLD2Q9H0B8 497 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 LIN7BQ9HAP6 207 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 SLC25A19Q9HC21 320 aa11.66□□□□□ -0.54
RETREG3-201ENST00000309428 C4orf47A7E2U8 309 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 SC5DO75845 299 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 F13BP05160 661 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 THEGLP0DJG4 465 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 CTHP32929 405 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 TNFRSF17Q02223 184 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 GAB4Q2WGN9 574 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 TMEM92Q6UXU6 159 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 KIAA0907Q7Z7F0 614 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms