RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 OR8K3Q8NH51 312 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MGAT4CQ9UBM8 478 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZNF346Q9UL40 294 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 DOCK11Q5JSL3 2073 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PLXNA2O75051 1894 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TREML2Q5T2D2 321 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZNF620Q6ZNG0 422 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 KDF1Q8NAX2 398 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 BPIFA2Q96DR5 249 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 BOD1Q96IK1 185 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PITX2Q99697 317 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 C19orf24Q9BVV8 132 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SPHK1Q9NYA1 384 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TMED3Q9Y3Q3 217 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 NACAE9PAV3 2078 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 XRCC2O43543 280 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GPR75O95800 540 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 P04436 131 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 DRD5P21918 477 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 BDKRB2P30411 391 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 RAB13P51153 203 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 DEFA5Q01523 94 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PELI3Q8N2H9 469 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZBTB34Q8NCN2 500 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 NFKBIDQ8NI38 313 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SCARB1Q8WTV0 552 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SPATA6Q9NWH7 488 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 RBPJLQ9UBG7 517 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 NSG2Q9Y328 171 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR6C6A6NF89 314 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 LRP3O75074 770 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ASCL5Q7RTU5 278 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ANKRD33Q7Z3H0 272 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR5AP2Q8NGF4 316 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SDSLQ96GA7 329 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PEBP4Q96S96 227 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ACTL7AQ9Y615 435 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 A0A087WUU8 490 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 TMEM82A0PJX8 343 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 IQCF3P0C7M6 154 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SDHAP31040 664 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 UFM1P61960 85 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CHRNA6Q15825 494 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ARHGAP11BQ3KRB8 267 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PRAMEF19Q5SWL8 479 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 COL13A1Q5TAT6 717 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 SEZ6L2Q6UXD5 910 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CSNK1A1LQ8N752 337 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CSNK1G3Q9Y6M4 447 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FNDC1Q4ZHG4 1894 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 HOXD4P09016 255 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC1A3P43003 542 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC35A2P78381 396 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ENDOGQ14249 297 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC17A1Q14916 467 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SOWAHCQ53LP3 525 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR4N5Q8IXE1 308 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 DTWD1Q8N5C7 304 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 EGLN2Q96KS0 407 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 DNAJB11Q9UBS4 358 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 METTL15A6NJ78 407 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ANKRD30BLA7E2S9 258 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PLPP2O43688 288 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SSX5O60225 188 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GALK1P51570 392 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 DLX2Q07687 328 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 TSTQ16762 297 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 ABHD17BQ5VST6 288 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 NADSYN1Q6IA69 706 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ZNF695Q8IW36 515 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ADGRG5Q8IZF4 528 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR6Q1Q8NGQ2 317 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 WRAP53Q9BUR4 548 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 HRASLS2Q9NWW9 162 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FAM183AA6NL82 134 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 KDM4EB2RXH2 506 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 MCRIP1C9JLW8 97 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 RNF225M0QZC1 329 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 CLDN5O00501 218 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FBP1P09467 338 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MAT2AP31153 395 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 OXA1LQ15070 435 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GLYR1Q49A26 553 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 TNFAIP8L2Q6P589 184 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 HFE2Q6ZVN8 426 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC16A9Q7RTY1 509 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CEACAM19Q7Z692 300 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MFSD9Q8NBP5 474 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PHOSPHO1Q8TCT1 267 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GINS3Q9BRX5 216 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ANTXRLA6NF34 631 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 IGLV3-25P01717 112 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 RPS13P62277 151 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 DHODHQ02127 395 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FBXO48Q5FWF7 155 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 LINC00346Q8IVM7 164 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PARP16Q8N5Y8 322 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ARL6IP6Q8N6S5 226 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 DCLRE1CQ96SD1 692 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 ALG12Q9BV10 488 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms