RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 RAB3IPQ96QF0 476 aaPredicted RBP19.87■□□□□ 0.77
HOXD4-201ENST00000306324 TACO1Q9BSH4 297 aaKnown RBP19.87■□□□□ 0.77
HOXD4-201ENST00000306324 MRPL39Q9NYK5 338 aaKnown RBP19.87■□□□□ 0.77
HOXD4-201ENST00000306324 ZNF229Q9UJW7 825 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 RASD1Q9Y272 281 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 IGKV3D-15A0A087WSY6 115 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 ZNF724A8MTY0 619 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 GPR171O14626 319 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 FKBP6O75344 327 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 KRT36O76013 467 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 OR7A10O76100 309 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 CST1P01037 141 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 IGF2P01344 180 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 FUT1P19526 365 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 SLC16A1P53985 500 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 PRKCDQ05655 676 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 SEC23BQ15437 767 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 OR2T5Q6IEZ7 315 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 NUFIP2Q7Z417 695 aaKnown RBP19.86■□□□□ 0.77
HOXD4-201ENST00000306324 LUZP2Q86TE4 346 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 CDK20Q8IZL9 346 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 OR9K2Q8NGE7 335 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 OR2T29Q8NH02 315 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 ALPK1Q96QP1 1244 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 SF3B5Q9BWJ5 86 aaKnown RBP19.86■□□□□ 0.77
HOXD4-201ENST00000306324 YY1AP1Q9H869 796 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 KCNJ16Q9NPI9 418 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 CCM2LQ9NUG4 571 aaPredicted RBP19.86■□□□□ 0.77
HOXD4-201ENST00000306324 TMCC3Q9ULS5 477 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 PROCRQ9UNN8 238 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 ADGRG4Q8IZF6 3080 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 TNFRSF11BO00300 401 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 OR6A2O95222 327 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 SAGP10523 405 aaPredicted RBP19.86■□□□□ 0.77
HOXD4-201ENST00000306324 AHCYP23526 432 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 EXOC3L2Q2M3D2 409 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 NANOGNBQ7Z5D8 188 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 GALNT5Q7Z7M9 940 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 OR4K5Q8NGD3 323 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 SLCO4A1Q96BD0 722 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 OPN3Q9H1Y3 402 aaPredicted RBP19.86■□□□□ 0.77
HOXD4-201ENST00000306324 PIGMQ9H3S5 423 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 NOSIPQ9Y314 301 aaKnown RBP19.86■□□□□ 0.77
HOXD4-201ENST00000306324 FLVCR1Q9Y5Y0 555 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 LYVE1Q9Y5Y7 322 aa19.86■□□□□ 0.77
HOXD4-201ENST00000306324 USP9YO00507 2555 aaPredicted RBP19.85■□□□□ 0.77
HOXD4-201ENST00000306324 A1L4Q6 167 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 SH3PXD2BA1X283 911 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 HTR3EA5X5Y0 456 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 MS4A18H0YCH9 400 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 ASAH2BP0C7U1 165 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 ADORA3P0DMS8 318 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 ZNF43P17038 809 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 MAKP20794 623 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 GPR4P46093 362 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 PPP1R8Q12972 351 aaKnown RBP19.85■□□□□ 0.77
HOXD4-201ENST00000306324 MS4A18Q3C1V0 323 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 ADPRHL1Q8NDY3 354 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 OXGR1Q96P68 337 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 FUZQ9BT04 418 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 REEP1Q9H902 201 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 U3KQV3 271 aa19.85■□□□□ 0.77
HOXD4-201ENST00000306324 ALPK2Q86TB3 2170 aa19.84■□□□□ 0.77
HOXD4-201ENST00000306324 C11orf98E9PRG8 122 aa19.84■□□□□ 0.77
HOXD4-201ENST00000306324 BLOC1S5-TXNDC5H3BN57 136 aa19.84■□□□□ 0.77
HOXD4-201ENST00000306324 PLPP3O14495 311 aa19.84■□□□□ 0.77
HOXD4-201ENST00000306324 GNGT2O14610 69 aa19.84■□□□□ 0.77
HOXD4-201ENST00000306324 PUDPQ08623 228 aa19.84■□□□□ 0.77
HOXD4-201ENST00000306324 C1DQ13901 141 aaKnown RBP19.84■□□□□ 0.77
HOXD4-201ENST00000306324 KPNB1Q14974 876 aaKnown RBP19.84■□□□□ 0.77
HOXD4-201ENST00000306324 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.84■□□□□ 0.77
HOXD4-201ENST00000306324 PAPD5Q8NDF8 572 aaKnown RBP19.84■□□□□ 0.77
HOXD4-201ENST00000306324 FAM46AQ96IP4 442 aaKnown RBP19.84■□□□□ 0.77
HOXD4-201ENST00000306324 KRCC1Q9NPI7 259 aaPredicted RBP19.84■□□□□ 0.77
HOXD4-201ENST00000306324 B3GAT1Q9P2W7 334 aa19.84■□□□□ 0.77
HOXD4-201ENST00000306324 SAMHD1Q9Y3Z3 626 aaKnown RBP19.84■□□□□ 0.77
HOXD4-201ENST00000306324 ERICH4A6NGS2 130 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 EFCAB9A8MZ26 197 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 OR10H3O60404 316 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 SERPINI2O75830 405 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 HPRP00739 348 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 CGAP01215 116 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 CD8BP10966 210 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 ASCL1P50553 236 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 POU4F3Q15319 338 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 CREB3L2Q70SY1 520 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 UEVLDQ8IX04 471 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 ZNF610Q8N9Z0 462 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 LIPHQ8WWY8 451 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 ZNF385AQ96PM9 386 aaKnown RBP19.83■□□□□ 0.76
HOXD4-201ENST00000306324 PLSCR4Q9NRQ2 329 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 VNN3Q9NY84 501 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 TMEM5Q9Y2B1 443 aa19.83■□□□□ 0.76
HOXD4-201ENST00000306324 MSTNO14793 375 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 MRPL33O75394 65 aaKnown RBP19.82■□□□□ 0.76
HOXD4-201ENST00000306324 TIPRLO75663 272 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 HLA-DOBP13765 273 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 LIMS1P48059 325 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 HMGA2P52926 109 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 ACTR3P61158 418 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms