RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ZIC3O60481 467 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 APEHP13798 732 aaKnown RBP11.7□□□□□ -0.54
CCDC7-202ENST00000302316 ACVR2AP27037 513 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 HTR1FP30939 366 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 SDHAP31040 664 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 DEFB109BQ30KR1 87 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 GLYR1Q49A26 553 aaPredicted RBP11.7□□□□□ -0.54
CCDC7-202ENST00000302316 KLHL12Q53G59 568 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 ZNF362Q5T0B9 420 aaPredicted RBP11.7□□□□□ -0.54
CCDC7-202ENST00000302316 FAM122BQ7Z309 247 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 OR2M7Q8NG81 312 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 FAR1Q8WVX9 515 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 RORBQ92753 470 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 MUL1Q969V5 352 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 Q96M85 177 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 OR5B2Q96R09 309 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 PIGQQ9BRB3 760 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 HCAR1Q9BXC0 346 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 ZNF552Q9H707 407 aaPredicted RBP11.7□□□□□ -0.54
CCDC7-202ENST00000302316 ACOT13Q9NPJ3 140 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 ALKBH4Q9NXW9 302 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 NDUFA13Q9P0J0 144 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 GRHPRQ9UBQ7 328 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 AKAP13Q12802 2813 aa11.7□□□□□ -0.54
CCDC7-202ENST00000302316 A0A1W2PNR3 127 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 CCDC160A6NGH7 325 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 LIPT2A6NK58 231 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 M0R3G1 203 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 PLPP3O14495 311 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 APOL3O95236 402 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 RFPL3SP0C7P2 107 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 FKBP2P26885 142 aaKnown RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 GDF1P27539 372 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 ARG2P78540 354 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 C19orf57Q0VDD7 668 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 FOXO1Q12778 655 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 TBCEQ15813 527 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 GTF2IRD2BQ6EKJ0 949 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 YRDCQ86U90 279 aaKnown RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 GTF2IRD2Q86UP8 949 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 JAZF1Q86VZ6 243 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 SCAIQ8N9R8 606 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 ZNF248Q8NDW4 579 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 OR14L1PQ8NHC6 308 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 LGALS12Q96DT0 336 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 DTNBP1Q96EV8 351 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 TMEM80Q96HE8 168 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 TSPAN32Q96QS1 320 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 TUBA1CQ9BQE3 449 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 OR51V1Q9H2C8 321 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 INIPQ9NRY2 104 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 TAS2R16Q9NYV7 291 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 DCHS1Q96JQ0 3298 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 IRGMA1A4Y4 181 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 SLC34A2O95436 690 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 RAB36O95755 333 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 PLGP00747 810 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 ADRA2AP08913 450 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 SHC1P29353 583 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 CLK1P49759 484 aaKnown RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 SLC16A1P53985 500 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 TLE3Q04726 772 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 DBPQ10586 325 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 RAB40BQ12829 278 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 TMEM176BQ3YBM2 270 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 KLHL22Q53GT1 634 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 MEPCEQ7L2J0 689 aaKnown RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 SULF2Q8IWU5 870 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 GHDCQ8N2G8 530 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 MDS2Q8NDY4 140 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 FDCSPQ8NFU4 85 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 OR52I1Q8NGK6 324 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 OR9Q1Q8NGQ5 310 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 SMPDL3BQ92485 455 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 SLC39A7Q92504 469 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 C5orf34Q96MH7 638 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 NMNAT3Q96T66 252 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 RNF32Q9H0A6 362 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 CHST11Q9NPF2 352 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 B4GALT7Q9UBV7 327 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 KLF13Q9Y2Y9 288 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-202ENST00000302316 HDGFL3Q9Y3E1 203 aa11.69□□□□□ -0.54
CCDC7-202ENST00000302316 SLC22A31A6NKX4 558 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 ZNF99A8MXY4 864 aaPredicted RBP11.68□□□□□ -0.54
CCDC7-202ENST00000302316 IMPA2O14732 288 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 TLX3O43711 291 aaPredicted RBP11.68□□□□□ -0.54
CCDC7-202ENST00000302316 TRAPPC6AO75865 159 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 INMTO95050 263 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 TXNDC12O95881 172 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 SP1P08047 785 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 CLUP10909 449 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 CD46P15529 392 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 TTKP33981 857 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 OR2B6P58173 313 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 PUDPQ08623 228 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 KRR1Q13601 381 aaKnown RBP11.68□□□□□ -0.54
CCDC7-202ENST00000302316 EMC4Q5J8M3 183 aa11.68□□□□□ -0.54
CCDC7-202ENST00000302316 GPR139Q6DWJ6 353 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms