RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SOWAHCQ53LP3 525 aaPredicted RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DCAF12Q5T6F0 453 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 AAED1Q7RTV5 226 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PLPP7Q8NBV4 271 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR7G1Q8NGA0 311 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RBMXL1Q96E39 390 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TIMM29Q9BSF4 260 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF436Q9C0F3 470 aaPredicted RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MRPL22Q9NWU5 206 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MRPS28Q9Y2Q9 187 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NME7Q9Y5B8 376 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ARNTLO00327 626 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PRAMEF4O60810 478 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 EN2P19622 333 aaPredicted RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OPRD1P41143 372 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 EDDM3AQ14507 147 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 AARDQ4LEZ3 155 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PRSS45Q7RTY3 260 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR5AS1Q8N127 324 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SCCPDHQ8NBX0 429 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 LIPHQ8WWY8 451 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GATA6Q92908 595 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CNTNAP3Q9BZ76 1288 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 BOKQ9UMX3 212 aaPredicted RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PCDHGA5Q9Y5G8 931 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DNAJB6O75190 326 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CLEC2LP0C7M8 214 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TMEM71Q6P5X7 295 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SPNS2Q8IVW8 549 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CELF2-AS1Q8N7Q2 184 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FAM213BQ8TBF2 198 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GHSRQ92847 366 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DCLRE1CQ96SD1 692 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PARP12Q9H0J9 701 aaKnown RBP12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SLC2A1P11166 492 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PRKACBP22694 351 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SSR4P51571 173 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 AKR1C1Q04828 323 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PEA15Q15121 130 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZFP82Q8N141 532 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FGGYQ96C11 551 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SLC25A31Q9H0C2 315 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TMED7-TICAM2A0A0A6YYA0 188 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 K7ESM1 405 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TAPBPO15533 448 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 EDDM3BP56851 147 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DUSP7Q16829 419 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR5M11Q96RB7 305 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TMED7Q9Y3B3 224 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PRKNO60260 465 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NSA2O95478 260 aaKnown RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ALPLP05186 524 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 BLVRBP30043 206 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 BCL6P41182 706 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SLC10A1Q14973 349 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PHLDA2Q53GA4 152 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NRARPQ7Z6K4 114 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CPNE4Q96A23 557 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RAB3CQ96E17 227 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CDCA3Q99618 268 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZBTB42B2RXF5 422 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GDNFP39905 211 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CNTN4Q8IWV2 1026 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 UBE2FQ969M7 185 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MUCL1Q96DR8 90 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF578Q96N58 590 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZFP57Q9NU63 452 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DECR2Q9NUI1 292 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TMEM82A0PJX8 343 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SERINC4A6NH21 518 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MSTNO14793 375 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PRAF2O60831 178 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TK1P04183 234 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SERPINF1P36955 418 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PPT1P50897 306 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TGFBR3Q03167 851 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TESK1Q15569 626 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OTPQ5XKR4 325 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SYT9Q86SS6 491 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RETREG3Q86VR2 466 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CRYGNQ8WXF5 182 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 LINC01599Q8WXQ3 324 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OCSTAMPQ9BR26 566 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 C1orf198Q9H425 327 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CLEC2DQ9UHP7 191 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TMEM202A6NGA9 273 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HS3ST1O14792 307 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SIX6O95475 246 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NFYBP25208 207 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 AFF3P51826 1226 aaKnown RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HABP2Q14520 560 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ENTHD1Q8IYW4 607 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NTNG1Q9Y2I2 539 aa12.57□□□□□ -0.4
CHRFAM7A-201ENST00000299847 D6RAR5 112 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HTR2CP28335 458 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HOXA9P31269 272 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms