RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SMLR1H3BR10 107 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 CSF3P09919 207 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 RAB3BP20337 219 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 SNRPD2P62316 118 aaKnown RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 KCNJ8Q15842 424 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF79Q15937 498 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 MZT2BQ6NZ67 158 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 QSOX2Q6ZRP7 698 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 ARHGEF39Q8N4T4 335 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 TCF7L1Q9HCS4 588 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 MUC3AQ02505 3323 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 MEIOCA2RUB1 952 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 FLRT2O43155 660 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 SCRG1O75711 98 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 CDKN2AP42771 156 aaKnown RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 FASLGP48023 281 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 MRPL28Q13084 256 aaKnown RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 WBP2NLQ6ICG8 309 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 LRRN1Q6UXK5 716 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 POGLUT1Q8NBL1 392 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 FYTTD1Q96QD9 318 aaKnown RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 CRB3Q9BUF7 120 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 VN1R1Q9GZP7 353 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 GAREM1Q9H706 876 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 METTL7AQ9H8H3 244 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 TRDV1A0A1B0GX56 115 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 RENP00797 406 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 RPS4Y1P22090 263 aaKnown RBP8.48□□□□□ -1.05
PRDM9-201ENST00000296682 CCKBRP32239 447 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 NRG3P56975 720 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 NXPH1P58417 271 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 RPL18Q07020 188 aaKnown RBP8.48□□□□□ -1.05
PRDM9-201ENST00000296682 ACSM1Q08AH1 577 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 SELENBP1Q13228 472 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 GALEQ14376 348 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 OR7A5Q15622 319 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 ETFDHQ16134 617 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 HSD17B12Q53GQ0 312 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 LYSMD4Q5XG99 296 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 TMEM91Q6ZNR0 172 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 TMPRSS11FQ6ZWK6 438 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 TOR1AIP2Q8NFQ8 470 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 OR4M1Q8NGD0 313 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 BRIX1Q8TDN6 353 aaKnown RBP8.48□□□□□ -1.05
PRDM9-201ENST00000296682 PPP1R14AQ96A00 147 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 CTHRC1Q96CG8 243 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 FRMD6Q96NE9 622 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 DERL3Q96Q80 235 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 NOX4Q9NPH5 578 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF223Q9UK11 482 aaPredicted RBP8.48□□□□□ -1.05
PRDM9-201ENST00000296682 COPS3Q9UNS2 423 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF337Q9Y3M9 751 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 IQCMA0A1B0GVH7 501 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 J3QRE1 110 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 DCTN6O00399 190 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 PTTG1O95997 202 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 TFP02787 698 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 SPI1P17947 270 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 MAP2K3P46734 347 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 EMP2P54851 167 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 SIRPAP78324 504 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 PLAURQ03405 335 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 FGFBP1Q14512 234 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 INPP5JQ15735 1006 aaPredicted RBP8.48□□□□□ -1.05
PRDM9-201ENST00000296682 AGAP7PQ5VUJ5 663 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 OR7E24Q6IFN5 339 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 POMGNT2Q8NAT1 580 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 OR4D9Q8NGE8 314 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 OR5H6Q8NGV6 325 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 C1orf216Q8TAB5 229 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 PMM1Q92871 262 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 MR1Q95460 341 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 WDR76Q9H967 626 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 ADGRL4Q9HBW9 690 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 NEK6Q9HC98 313 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 CPNE5Q9HCH3 593 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 RANGRFQ9HD47 186 aaPredicted RBP8.48□□□□□ -1.05
PRDM9-201ENST00000296682 TRBV11-1A0A0K0K1C0 115 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 H0YIG0 161 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 PPM1BO75688 479 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 AHSA1O95433 338 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 GLULP15104 373 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 CSF2RBP32927 897 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 PPP3R1P63098 170 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 BTBD16Q32M84 506 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 VASNQ6EMK4 673 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 RPL13AP3Q6NVV1 102 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 TMPRSS12Q86WS5 348 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 LINC00346Q8IVM7 164 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 MAFAQ8NHW3 353 aaPredicted RBP8.48□□□□□ -1.05
PRDM9-201ENST00000296682 TAAR8Q969N4 342 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 SLC35B4Q969S0 331 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 LPAR4Q99677 370 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF649Q9BS31 505 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 SRRQ9GZT4 340 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 SP140LQ9H930 580 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 ERVMER34-1Q9H9K5 563 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 SUSD2Q9UGT4 822 aa8.48□□□□□ -1.05
PRDM9-201ENST00000296682 TBC1D24Q9ULP9 559 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms