RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ERMAPQ96PL5 475 aaPredicted RBP14.08□□□□□ -0.15
LSM6-201ENST00000296581 PTDSS2Q9BVG9 487 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 C12orf4Q9NQ89 552 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 EXOGQ9Y2C4 368 aaKnown RBP14.08□□□□□ -0.15
LSM6-201ENST00000296581 ZC3H12DA2A288 527 aaKnown RBP14.08□□□□□ -0.16
LSM6-201ENST00000296581 STMND1H3BQB6 276 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 MASP2O00187 686 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 SLC25A12O75746 678 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 TSPAN9O75954 239 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 GABARAPO95166 117 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 IFNGP01579 166 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 SERPINA7P05543 415 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 ZNF3P17036 446 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 RPS5P46782 204 aaKnown RBP14.08□□□□□ -0.16
LSM6-201ENST00000296581 IL10RAQ13651 578 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 GXYLT1Q4G148 440 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 SLC25A53Q5H9E4 307 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 POMZP3Q6PJE2 187 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 IL20RBQ6UXL0 311 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 MEPCEQ7L2J0 689 aaKnown RBP14.08□□□□□ -0.16
LSM6-201ENST00000296581 NANOGP1Q8N7R0 232 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 PROKR2Q8NFJ6 384 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 MOSPD2Q8NHP6 518 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 HCAR1Q9BXC0 346 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 SH2D2AQ9NP31 389 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 POLE4Q9NR33 117 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 CLEC2DQ9UHP7 191 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 KLHL21Q9UJP4 597 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 IER3IP1Q9Y5U9 82 aa14.08□□□□□ -0.16
LSM6-201ENST00000296581 LOC101059948A0A1B0GTJ6 334 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 B8ZZF3 427 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 PRR23D1E9PI22 279 aaPredicted RBP14.07□□□□□ -0.16
LSM6-201ENST00000296581 M0R3G1 203 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 MT-ATP6P00846 226 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 PRR23D2P0DMB1 279 aaPredicted RBP14.07□□□□□ -0.16
LSM6-201ENST00000296581 APEHP13798 732 aaKnown RBP14.07□□□□□ -0.16
LSM6-201ENST00000296581 NOS3P29474 1203 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 RPL4P36578 427 aaKnown RBP14.07□□□□□ -0.16
LSM6-201ENST00000296581 LIPAP38571 399 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 AQP2P41181 271 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 APOBEC1P41238 236 aaKnown RBP14.07□□□□□ -0.16
LSM6-201ENST00000296581 GALK2Q01415 458 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 CRMP1Q14194 572 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 ARSKQ6UWY0 536 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 TMPRSS12Q86WS5 348 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 SLC37A3Q8NCC5 494 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 OR2M3Q8NG83 312 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 S100ZQ8WXG8 99 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 OR5M11Q96RB7 305 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 MED20Q9H944 212 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 SLC6A5Q9Y345 797 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 WDFY3Q8IZQ1 3526 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 AHCTF1Q8WYP5 2266 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 SNPHO15079 494 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 CSRP1P21291 193 aaKnown RBP14.07□□□□□ -0.16
LSM6-201ENST00000296581 CTF1Q16619 201 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 ARMC4Q5T2S8 1044 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 C1orf140Q5VVS0 124 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 C1QL3Q5VWW1 255 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 P2RY8Q86VZ1 359 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 FADS6Q8N9I5 356 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 OR6S1Q8NH40 331 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 PAQR8Q8TEZ7 354 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 KISS1RQ969F8 398 aaPredicted RBP14.07□□□□□ -0.16
LSM6-201ENST00000296581 NPAS1Q99742 590 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 MND1Q9BWT6 205 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 ADAM18Q9Y3Q7 739 aa14.07□□□□□ -0.16
LSM6-201ENST00000296581 EML6Q6ZMW3 1958 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 BLOC1S5-TXNDC5H3BN57 136 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 HIST1H1CP16403 213 aaKnown RBP14.06□□□□□ -0.16
LSM6-201ENST00000296581 CD36P16671 472 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 SLC2A5P22732 501 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 DOC2BQ14184 412 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 FAM69AQ5T7M9 428 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 RAB43Q86YS6 212 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 CCDC28AQ8IWP9 274 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 WDSUB1Q8N9V3 476 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 ADAMTS17Q8TE56 1095 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 KATNB1Q9BVA0 655 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 JAM3Q9BX67 310 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 ANGPTL4Q9BY76 406 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 RACGAP1Q9H0H5 632 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 STMN3Q9NZ72 180 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 EXOSC1Q9Y3B2 195 aaKnown RBP14.06□□□□□ -0.16
LSM6-201ENST00000296581 CCDC182A6NF36 153 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 IGHA1P01876 353 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 CD14P08571 375 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 PAICSP22234 425 aaKnown RBP14.06□□□□□ -0.16
LSM6-201ENST00000296581 ETV1P50549 477 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 ZNF41P51814 821 aaPredicted RBP14.06□□□□□ -0.16
LSM6-201ENST00000296581 MAP2K6P52564 334 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 RPL18Q07020 188 aaKnown RBP14.06□□□□□ -0.16
LSM6-201ENST00000296581 FOXF1Q12946 379 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 MED22Q15528 200 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 PLPPR5Q32ZL2 321 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 ALG10Q5BKT4 473 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 ARMCX4Q5H9R4 360 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 TUBA3EQ6PEY2 450 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 MAMDC2Q7Z304 686 aaPredicted RBP14.06□□□□□ -0.16
LSM6-201ENST00000296581 FAM122BQ7Z309 247 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms