RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 CALML5Q9NZT1 146 aa13.84□□□□□ -0.19
TMEM41A-201ENST00000296254 CHST2Q9Y4C5 530 aa13.84□□□□□ -0.19
TMEM41A-201ENST00000296254 IGHV2OR16-5A0A0B4J2B6 119 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF503-AS2A6NEH8 195 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 RFXANKO14593 260 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 TM9SF1O15321 606 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 FZD7O75084 574 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF432O94892 652 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 AHSA1O95433 338 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 BCHEP06276 602 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 CBR1P16152 277 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 NPR2P20594 1047 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 APEX1P27695 318 aaKnown RBP13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 CRISP3P54108 245 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 SERPINA11Q86U17 422 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 MEX3DQ86XN8 651 aaKnown RBP13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 ZCCHC24Q8N2G6 241 aaKnown RBP13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF786Q8N393 782 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 CLIP4Q8N3C7 705 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 LINC01356Q8N9X3 169 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 MFSD8Q8NHS3 518 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 C1orf159Q96HA4 380 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 ANKRD27Q96NW4 1050 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 SNX18Q96RF0 628 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 TMEM109Q9BVC6 243 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 SLC6A13Q9NSD5 602 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 B3GAT1Q9P2W7 334 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 PCDHB14Q9Y5E9 798 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 GPR45Q9Y5Y3 372 aa13.83□□□□□ -0.2
TMEM41A-201ENST00000296254 SDHDO14521 159 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 IGFBP1P08833 259 aaPredicted RBP13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 ETFAP13804 333 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF43P17038 809 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 BGNP21810 368 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 CDH15P55291 814 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 CLDN17P56750 224 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 ARF1P84077 181 aaKnown RBP13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 EGR4Q05215 589 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 NPRL3Q12980 569 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 RIN1Q13671 783 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 LARS2Q15031 903 aaKnown RBP13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 RPS26P11Q5JNZ5 115 aaPredicted RBP13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 SPATA21Q7Z572 469 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 CDK20Q8IZL9 346 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 KDM8Q8N371 416 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 GLB1L3Q8NCI6 653 aaPredicted RBP13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 SLC38A5Q8WUX1 472 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 ZBTB18Q99592 522 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 NOX3Q9HBY0 568 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 SSU72Q9NP77 194 aaKnown RBP13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 DYNLRB1Q9NP97 96 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 PNPOQ9NVS9 261 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 SEC14L4Q9UDX3 406 aa13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 TMEFF2Q9UIK5 374 aaPredicted RBP13.82□□□□□ -0.2
TMEM41A-201ENST00000296254 TMEM129A0AVI4 362 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 ITGA2P17301 1181 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 GTF2E2P29084 291 aaKnown RBP13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 ARR3P36575 388 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 SRP14P37108 136 aaKnown RBP13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 DSTNP60981 165 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 SNTB2Q13425 540 aaKnown RBP13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 TRIP10Q15642 601 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 ADRM1Q16186 407 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 KRT71Q3SY84 523 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 ATG16L1Q676U5 607 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 CKAP2Q8WWK9 683 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 SLC25A36Q96CQ1 311 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 TMEM19Q96HH6 336 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 SPATA9Q9BWV2 254 aa13.81□□□□□ -0.2
TMEM41A-201ENST00000296254 TENM1Q9UKZ4 2725 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 VSTM5A8MXK1 200 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 SLC43A1O75387 559 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 IFNGR1P15260 489 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 CRATP43155 626 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 BST1Q10588 318 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 STX3Q13277 289 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 CEACAM16Q2WEN9 425 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 C6orf89Q6UWU4 347 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 MDP1Q86V88 176 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 UBASH3BQ8TF42 649 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 SLC35B4Q969S0 331 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF837Q96EG3 531 aaPredicted RBP13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 KTI12Q96EK9 354 aaPredicted RBP13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 ARMC7Q9H6L4 198 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 TPT1P8Q9HAU6 139 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 CACYBPQ9HB71 228 aaKnown RBP13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 CRLF2Q9HC73 371 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 GPR35Q9HC97 309 aa13.8□□□□□ -0.2
TMEM41A-201ENST00000296254 SH3PXD2BA1X283 911 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 ZNF99A8MXY4 864 aaPredicted RBP13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 M0R082 166 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 RGS16O15492 202 aaPredicted RBP13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 TRAF3IP2O43734 574 aaPredicted RBP13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 SEC14L2O76054 403 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 IL6P05231 212 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 ZCCHC18P0CG32 403 aa13.79□□□□□ -0.2
TMEM41A-201ENST00000296254 PCMT1P22061 227 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms