RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SULF2Q8IWU5 870 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 ENTHD1Q8IYW4 607 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 LMF2Q9BU23 707 aaKnown RBP10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 CNTNAP3Q9BZ76 1288 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC25A31Q9H0C2 315 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF281Q9Y2X9 895 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 BOLA1Q9Y3E2 137 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 FBXO7Q9Y3I1 522 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 B3GALT1Q9Y5Z6 326 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 OBSL1O75147 1896 aa10.98□□□□□ -0.65
SYNGAP1-201ENST00000293748 MYOFQ9NZM1 2061 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 HSBP1L1C9JCN9 74 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 PRKAR1BP31321 381 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 CX3CR1P49238 355 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 SF3B4Q15427 424 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■■■□ 20.9
SYNGAP1-201ENST00000293748 CD276Q5ZPR3 534 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 MAML2Q8IZL2 1156 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 ISL2Q96A47 359 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR1F2PQ96R84 312 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 GSX2Q9BZM3 304 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 MBD1Q9UIS9 605 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR2A25A4D2G3 310 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 NPIPB15A6NHN6 443 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 FAM183AA6NL82 134 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 FAM171A2A8MVW0 826 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 GPR137BO60478 399 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 S100A11P31949 105 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 FXYD4P59646 89 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 HBA1P69905 142 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 SSX2Q16385 188 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 AVPI1Q5T686 147 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 GPR139Q6DWJ6 353 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 FAM180BQ6P0A1 224 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 TMPPEQ6ZT21 453 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 NLRP8Q86W28 1048 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR51D1Q8NGF3 324 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR5D14Q8NGL3 314 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR9A2Q8NGT5 310 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 C1GALT1Q9NS00 363 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 MYO18AQ92614 2054 aaKnown RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZNF705GA8MUZ8 300 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 BRINP1O60477 761 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 MED6O75586 246 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 HTR3BO95264 441 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 C1QBP02746 253 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 FBLP22087 321 aaKnown RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 HLA-DMAP28067 261 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 CLDN2P57739 230 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 ACTBL2Q562R1 376 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 UNQ6126/PRO20091Q6UXV3 157 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 PELI3Q8N2H9 469 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 METTL27Q8N6F8 245 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 Q8N9G6 341 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 GPR26Q8NDV2 337 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 ASB11Q8WXH4 323 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 CTRCQ99895 268 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZFYVE21Q9BQ24 234 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 TNFRSF10CO14798 259 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 FOSL1P15407 271 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 PLA2G5P39877 138 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 RPL23AP62750 156 aaKnown RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 GRM7Q14831 915 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 PHF19Q5T6S3 580 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 RNF113BQ8IZP6 322 aaKnown RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR6F1Q8NGZ6 308 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 OR1S1Q8NH92 325 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 ZFAND1Q8TCF1 268 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 PHYHIPQ92561 330 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC35B4Q969S0 331 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 FAM212BQ9NTI7 297 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 CAMK2AQ9UQM7 478 aa10.97□□□□□ -0.65
SYNGAP1-201ENST00000293748 RAC2P15153 192 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 ADRA1AP35348 466 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 DAP3P51398 398 aaKnown RBP10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 POLR2HP52434 150 aaKnown RBP10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 CAV3P56539 151 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 RPS25P62851 125 aaKnown RBP10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 CDK3Q00526 305 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 BATFQ16520 125 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 KCTD11Q693B1 232 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 UEVLDQ8IX04 471 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 ACOT4Q8N9L9 421 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC2A12Q8TD20 617 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 DOK4Q8TEW6 326 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 SPTSSAQ969W0 71 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 LYSMD1Q96S90 227 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 QRSL1Q9H0R6 528 aaKnown RBP10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 TCEAL2Q9H3H9 227 aaPredicted RBP10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 PLCXD1Q9NUJ7 323 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 PLEKHJ1Q9NW61 149 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 ATG2BQ96BY7 2078 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 TRDV1A0A1B0GX56 115 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 MEIS3P1A6NDR6 274 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 C4orf47A7E2U8 309 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 CNOT4O95628 575 aaKnown RBP10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 PSPHP78330 225 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 SLC14A1Q13336 389 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 SFXN4Q6P4A7 337 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 IL20RBQ6UXL0 311 aa10.96□□□□□ -0.65
SYNGAP1-201ENST00000293748 GPR137CQ8N3F9 429 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms