RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 EDAQ92838 391 aa11.84□□□□□ -0.51
PTCD1-201ENST00000292478 TMEM184BQ9Y519 407 aaPredicted RBP11.84□□□□□ -0.51
PTCD1-201ENST00000292478 F8W036 122 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 PSMB1P20618 241 aaKnown RBP11.83□□□□□ -0.52
PTCD1-201ENST00000292478 IRS1P35568 1242 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 LANCL3Q6ZV70 420 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 FAM57BQ71RH2 274 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 SLC16A14Q7RTX9 510 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 NKAIN3Q8N8D7 197 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 RAB39BQ96DA2 213 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 GABARAPL3Q9BY60 117 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 MED20Q9H944 212 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 NPFFR2Q9Y5X5 522 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 GLI3P10071 1580 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 GOLGA4Q13439 2230 aaKnown RBP11.83□□□□□ -0.52
PTCD1-201ENST00000292478 RREB1Q92766 1687 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 SIGLEC6O43699 453 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 SSX5O60225 188 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 ADPRHP54922 357 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 BCL2A1Q16548 175 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 TMEFF1Q8IYR6 380 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 STK35Q8TDR2 534 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 SGCZQ96LD1 299 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 ULBP3Q9BZM4 244 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 UBQLN3Q9H347 655 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 NFYAP23511 347 aaPredicted RBP11.83□□□□□ -0.52
PTCD1-201ENST00000292478 EPHA5P54756 1037 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 ISL1P61371 349 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 C14orf28Q4W4Y0 310 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 ELP2Q6IA86 826 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 NANOGP1Q8N7R0 232 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 CPT1CQ8TCG5 803 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 PIGQQ9BRB3 760 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF649Q9BS31 505 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 PLEKHA3Q9HB20 300 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 FGF21Q9NSA1 209 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 DAPP1Q9UN19 280 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 NME7Q9Y5B8 376 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 ARRDC5A6NEK1 342 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 TNFRSF10AO00220 468 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 OR13H1Q8NG92 308 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 OR1J2Q8NGS2 313 aa11.83□□□□□ -0.52
PTCD1-201ENST00000292478 LINC00615Q96LM1 132 aaPredicted RBP11.83□□□□□ -0.52
PTCD1-201ENST00000292478 A0A1B0GX78 115 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 RNF212BA8MTL3 300 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 IFNA4P05014 189 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 MMP11P24347 488 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 HLA-DMAP28067 261 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 TRIM23P36406 574 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 LYPD4Q6UWN0 246 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 WDSUB1Q8N9V3 476 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 NMNAT3Q96T66 252 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 SIT1Q9Y3P8 196 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 SERPINA2P20848 420 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 CCR5P51681 352 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 RRADP55042 308 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 GAB1Q13480 694 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 EXOSC6Q5RKV6 272 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF684Q5T5D7 378 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 MTFR2Q6P444 385 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 AAED1Q7RTV5 226 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 CAMKMTQ7Z624 323 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 LAX1Q8IWV1 398 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 CMSS1Q9BQ75 279 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 PAPOLGQ9BWT3 736 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 MBNL1Q9NR56 388 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 DNAJB11Q9UBS4 358 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 KIF25Q9UIL4 384 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 SLC22A23A1A5C7 686 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 FZD6O60353 706 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 PTPN6P29350 595 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 PIGAP37287 484 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 GDNFP39905 211 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 CASP3P42574 277 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 CSNK1EP49674 416 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 TPMTP51580 245 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 CLDN17P56750 224 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 ELAVL1Q15717 326 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 EXT1Q16394 746 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 PAPD4Q6PIY7 484 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 CD300LGQ6UXG3 332 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 DNAJC5GQ8N7S2 189 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 SLC25A43Q8WUT9 341 aaPredicted RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 GIMAP1Q8WWP7 306 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 OR1E3Q8WZA6 343 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 MIB2Q96AX9 1013 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 OR5M11Q96RB7 305 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 OR6C1Q96RD1 312 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 TM7SF3Q9NS93 570 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 ACER3Q9NUN7 267 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 PLEKHM1Q9Y4G2 1056 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 NCR1O76036 304 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 SNRPBP14678 240 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 SQSTM1Q13501 440 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 SLC22A24Q8N4F4 322 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 FAM26EQ8N5C1 309 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 SLC16A11Q8NCK7 471 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 OR9K2Q8NGE7 335 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms