RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 LOC100653049A0A140TA62 436 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 TRIM64A6NGJ6 449 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 TRIM64BA6NI03 449 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 LRRN3E7EW58 273 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 M0QX08 132 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 SHOX2O60902 331 aaPredicted RBP8.59□□□□□ -1.03
CCDC58-201ENST00000291458 KRT34O76011 436 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 MFN2O95140 757 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 LGI1O95970 557 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 NQO1P15559 274 aaKnown RBP8.59□□□□□ -1.03
CCDC58-201ENST00000291458 TNFRSF1BP20333 461 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 PCGF2P35227 344 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 CDKN1AP38936 164 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 P2RY4P51582 365 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 IRX1P78414 480 aaPredicted RBP8.59□□□□□ -1.03
CCDC58-201ENST00000291458 H3F3AP84243 136 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 SLC25A3Q00325 362 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 EGR4Q05215 589 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 C1DQ13901 141 aaKnown RBP8.59□□□□□ -1.03
CCDC58-201ENST00000291458 LRRC23Q53EV4 343 aaPredicted RBP8.59□□□□□ -1.03
CCDC58-201ENST00000291458 HIKESHIQ53FT3 197 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 KLHL24Q6TFL4 600 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 RBM45Q8IUH3 476 aaKnown RBP8.59□□□□□ -1.03
CCDC58-201ENST00000291458 ZIC4Q8N9L1 334 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 GPR32P1Q8NGA4 272 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 STK35Q8TDR2 534 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 STON2Q8WXE9 905 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 SLC38A4Q969I6 547 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 TAAR8Q969N4 342 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 TAMM41Q96BW9 452 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 RCN3Q96D15 328 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 RADILQ96JH8 1075 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 TRIM2Q9C040 744 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 CXorf56Q9H5V9 222 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 TMEM45AQ9NWC5 275 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 KLHL14Q9P2G3 628 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 EGFL7Q9UHF1 273 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 MAGED1Q9Y5V3 778 aaPredicted RBP8.59□□□□□ -1.03
CCDC58-201ENST00000291458 USF3Q68DE3 2245 aa8.59□□□□□ -1.03
CCDC58-201ENST00000291458 A0A096LPE4 126 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 A0A0B4J2E0 115 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 A0A1B0GX12 115 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 ZNF587BE7ETH6 402 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 C11orf98E9PRG8 122 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 H7C1Q1 480 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 FXYD1O00168 92 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 AIM2O14862 343 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 ARHGEF9O43307 516 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 TPST2O60704 377 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 NPIPB7O75200 414 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 UPK3AO75631 287 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 SOD3P08294 240 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 CDH12P55289 794 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 ATP5J2P56134 94 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 RPS4XP62701 263 aaKnown RBP8.58□□□□□ -1.04
CCDC58-201ENST00000291458 CYLC2Q14093 348 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-201ENST00000291458 NPTX1Q15818 432 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 GABRA6Q16445 453 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 ZNF672Q499Z4 452 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-201ENST00000291458 TIMM23BQ5SRD1 257 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 SLC22A25Q6T423 547 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 DEF8Q6ZN54 512 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 C1orf229Q6ZS94 237 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-201ENST00000291458 OR4D11Q8NGI4 311 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 OR6T1Q8NGN1 323 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 LILRB1Q8NHL6 650 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-201ENST00000291458 MFSD8Q8NHS3 518 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 C10orf82Q8WW14 230 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 DNAJA4Q8WW22 397 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-201ENST00000291458 HTRA1Q92743 480 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 TMEM45BQ96B21 275 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 SLC47A1Q96FL8 570 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 MOGAT1Q96PD6 335 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 TMEM204Q9BSN7 226 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 ASPNQ9BXN1 380 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 HEATR1Q9H583 2144 aaKnown RBP8.58□□□□□ -1.04
CCDC58-201ENST00000291458 KAT8Q9H7Z6 458 aaKnown RBP8.58□□□□□ -1.04
CCDC58-201ENST00000291458 SAR1AQ9NR31 198 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 PARPBPQ9NWS1 579 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 RASD1Q9Y272 281 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 SLC25A15Q9Y619 301 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 HIVEP1P15822 2718 aa8.58□□□□□ -1.04
CCDC58-201ENST00000291458 TRAV36DV7A0A075B6V5 113 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 ADARB2-AS1A8MUL3 147 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 SHISA9B4DS77 424 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 FTCDNL1E5RQL4 147 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 ATP6V1G2-DDX39BF2Z307 99 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 HPRP00739 348 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 UMPSP11172 480 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 ZNF43P17038 809 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 CD247P20963 164 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 MPGP29372 298 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 CAPZA2P47755 286 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 MAP2K6P52564 334 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 PCBP3P57721 371 aaKnown RBP8.57□□□□□ -1.04
CCDC58-201ENST00000291458 ROR2Q01974 943 aaKnown RBP8.57□□□□□ -1.04
CCDC58-201ENST00000291458 POU3F1Q03052 451 aaPredicted RBP8.57□□□□□ -1.04
CCDC58-201ENST00000291458 RBBP4Q09028 425 aa8.57□□□□□ -1.04
CCDC58-201ENST00000291458 PMS2P3Q13401 168 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms