RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 MOGAT1Q96PD6 335 aa11.86□□□□□ -0.51
PSMB4-201ENST00000290541 FUZQ9BT04 418 aa11.86□□□□□ -0.51
PSMB4-201ENST00000290541 DENND2DQ9H6A0 471 aaPredicted RBP11.86□□□□□ -0.51
PSMB4-201ENST00000290541 C20orf141Q9NUB4 165 aa11.86□□□□□ -0.51
PSMB4-201ENST00000290541 CLEC4AQ9UMR7 237 aa11.86□□□□□ -0.51
PSMB4-201ENST00000290541 TRAPPC4Q9Y296 219 aa11.86□□□□□ -0.51
PSMB4-201ENST00000290541 A0A0G2JNJ9 132 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 MBD3L4A6NDZ8 208 aaPredicted RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 MBD3L3A6NE82 208 aaPredicted RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 MBD3L5A6NJ08 208 aaPredicted RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 FKBP6O75344 327 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 AKR7A3O95154 331 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 AHSA1O95433 338 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 SYNGR4O95473 234 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 CH25HO95992 272 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 HOXD4P09016 255 aaPredicted RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 ITGA2P17301 1181 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 FUT1P19526 365 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 GRPRP30550 384 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 RRM2P31350 389 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 P2RY4P51582 365 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 AGFG1P52594 562 aaKnown RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 FOXF2Q12947 444 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 SLC46A3Q7Z3Q1 461 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 CCDC71Q8IV32 467 aaPredicted RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 LRRC17Q8N6Y2 441 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 TMEM99Q8N816 258 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 PAPD5Q8NDF8 572 aaKnown RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 MBD3L2Q8NHZ7 208 aaPredicted RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 TMEM158Q8WZ71 300 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 WNT2BQ93097 391 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 RSRC1Q96IZ7 334 aaKnown RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 KLHL13Q9P2N7 655 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 Q9UFV3 132 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 ING1Q9UK53 422 aaPredicted RBP11.85□□□□□ -0.51
PSMB4-201ENST00000290541 ZNF175Q9Y473 711 aa11.85□□□□□ -0.51
PSMB4-201ENST00000290541 A0A1W2PRQ8 180 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 FZD7O75084 574 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 TIPRLO75663 272 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 MAKP20794 623 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 CEACAM8P31997 349 aaPredicted RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 IFNA8P32881 189 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 RBM34P42696 430 aaKnown RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 LIMS1P48059 325 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 ACTR3P61158 418 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 CSNK2A1P68400 391 aaPredicted RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 SLC35A1P78382 337 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 H3F3AP84243 136 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 TFF3Q07654 80 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 DGCR6Q14129 220 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 LAPTM4AQ15012 233 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 ZNF74Q16587 644 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 EXOC3L2Q2M3D2 409 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 FGD3Q5JSP0 725 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 FCRLAQ7L513 359 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 P4HA3Q7Z4N8 544 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 TMEM179BQ7Z7N9 219 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 LIX1LQ8IVB5 337 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 NRMQ8IXM6 262 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 GCNT2Q8N0V5 402 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 KDM8Q8N371 416 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 C10orf53Q8N6V4 93 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 OR4C15Q8NGM1 316 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 MFSD8Q8NHS3 518 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 RNF128Q8TEB7 428 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 ABHD3Q8WU67 409 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 ACOT11Q8WXI4 607 aaPredicted RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 CPNE4Q96A23 557 aaPredicted RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 ZNF775Q96BV0 537 aaPredicted RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 INTS12Q96CB8 462 aaKnown RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 HS6ST2Q96MM7 605 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 RAB3IPQ96QF0 476 aaPredicted RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 ZNF347Q96SE7 839 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 TAPBPLQ9BX59 468 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 PRRG4Q9BZD6 226 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 RNF122Q9H9V4 155 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 TIGARQ9NQ88 270 aa11.84□□□□□ -0.51
PSMB4-201ENST00000290541 PAQR5Q9NXK6 330 aaPredicted RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 MCTS1Q9ULC4 181 aaKnown RBP11.84□□□□□ -0.51
PSMB4-201ENST00000290541 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 M0R082 166 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 CYTIPO60759 359 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 RCBTB2O95199 551 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 GADD45GO95257 159 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 TIMP3P35625 211 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 SF3B4Q15427 424 aaKnown RBP eCLIP11.83□□□□□ -0.521e-6■□□□□ 8.2
PSMB4-201ENST00000290541 FAM69AQ5T7M9 428 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 RIPPLY2Q5TAB7 128 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 TMEM211Q6ICI0 200 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 OR2T5Q6IEZ7 315 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 ZNF730Q6ZMV8 503 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 MBOAT2Q6ZWT7 520 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 OR2T29Q8NH02 315 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 PYDC1Q8WXC3 89 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 POP5Q969H6 163 aaKnown RBP11.83□□□□□ -0.52
PSMB4-201ENST00000290541 SGTBQ96EQ0 304 aa11.83□□□□□ -0.52
PSMB4-201ENST00000290541 DUS3LQ96G46 650 aaKnown RBP11.83□□□□□ -0.52
PSMB4-201ENST00000290541 ZNF587Q96SQ5 575 aaPredicted RBP11.83□□□□□ -0.52
PSMB4-201ENST00000290541 EPYCQ99645 322 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms