RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 BCAP31P51572 246 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 CBFBQ13951 182 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 IDNKQ5T6J7 187 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 ARSKQ6UWY0 536 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 GHSRQ92847 366 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 SDHCQ99643 169 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-201ENST00000279247 EXOSC3Q9NQT5 275 aaKnown RBP16.28■□□□□ 0.2
CAPN1-201ENST00000279247 TMED7Q9Y3B3 224 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 D6RAR5 112 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 HPGDSO60760 199 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 TMCC2O75069 709 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 AVPR2P30518 371 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 OR10A3P58181 314 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 RPS4XP62701 263 aaKnown RBP16.28■□□□□ 0.2
CAPN1-201ENST00000279247 LGALS3BPQ08380 585 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 ODF4Q2M2E3 257 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 BTBD16Q32M84 506 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 SLC6A19Q695T7 634 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 CPEB2Q7Z5Q1 589 aaKnown RBP16.28■□□□□ 0.2
CAPN1-201ENST00000279247 OR5M1Q8NGP8 315 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 MIXL1Q9H2W2 232 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 ISYNA1Q9NPH2 558 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 KLHL21Q9UJP4 597 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 SLC6A5Q9Y345 797 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 FREM3P0C091 2139 aa16.28■□□□□ 0.2
CAPN1-201ENST00000279247 A0A075B6Q4 140 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 A0A087WV48 116 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 RGS9O75916 674 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-201ENST00000279247 HLA-DQA2P01906 255 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 IL11P20809 199 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 SLC6A8P48029 635 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 KRR1Q13601 381 aaKnown RBP16.27■□□□□ 0.2
CAPN1-201ENST00000279247 SPATC1Q76KD6 591 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 ZNF441Q8N8Z8 693 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 TSPAN32Q96QS1 320 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 TMEM43Q9BTV4 400 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 ULBP3Q9BZM4 244 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 SLC19A3Q9BZV2 496 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 HIF3AQ9Y2N7 669 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 HRH3Q9Y5N1 445 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 TMEM72A0PK05 275 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 FABP12A6NFH5 140 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 B4DXG7 233 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 FADS1O60427 444 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 ASAH2BP0C7U1 165 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 P2RX1P51575 399 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 BAK1Q16611 211 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 DDI2Q5TDH0 399 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 PM20D2Q8IYS1 436 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 FAM181AQ8N9Y4 354 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 C7orf57Q8NEG2 295 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 WDR77Q9BQA1 342 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-201ENST00000279247 IER2Q9BTL4 223 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 TGIF2Q9GZN2 237 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 ADAM19Q9H013 955 aa16.27■□□□□ 0.2
CAPN1-201ENST00000279247 EML6Q6ZMW3 1958 aa16.27■□□□□ 0.19
CAPN1-201ENST00000279247 TO15178 435 aa16.27■□□□□ 0.19
CAPN1-201ENST00000279247 ANKRD34CP0C6C1 535 aa16.27■□□□□ 0.19
CAPN1-201ENST00000279247 MELKQ14680 651 aa16.27■□□□□ 0.19
CAPN1-201ENST00000279247 RIF1Q5UIP0 2472 aaKnown RBP16.27■□□□□ 0.19
CAPN1-201ENST00000279247 NR2C2APQ86WQ0 139 aa16.27■□□□□ 0.19
CAPN1-201ENST00000279247 NFAM1Q8NET5 270 aaPredicted RBP16.27■□□□□ 0.19
CAPN1-201ENST00000279247 PELI1Q96FA3 418 aa16.27■□□□□ 0.19
CAPN1-201ENST00000279247 RXFP3Q9NSD7 469 aa16.27■□□□□ 0.19
CAPN1-201ENST00000279247 CER1O95813 267 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 EDNRAP25101 427 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 FGF9P31371 208 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-201ENST00000279247 DIO1P49895 249 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 ZNF79Q15937 498 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 MESTQ5EB52 335 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 PRAMEF20Q5VT98 475 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 CD200R1LQ6Q8B3 271 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 ADGRG3Q86Y34 549 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 OR10G3Q8NGC4 313 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 ARPC3O15145 178 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 TFPIP10646 304 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 SDHAP31040 664 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 ZNF181Q2M3W8 571 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 PYDC2Q56P42 97 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 TUBA3EQ6PEY2 450 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 OR6N2Q8NGY6 317 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 TMCO6Q96DC7 493 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 ARL5BQ96KC2 179 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 PTRH2Q9Y3E5 179 aaKnown RBP16.26■□□□□ 0.19
CAPN1-201ENST00000279247 V9GYH0 126 aa16.26■□□□□ 0.19
CAPN1-201ENST00000279247 RTTNQ86VV8 2226 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 ZFHX2Q9C0A1 2572 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-201ENST00000279247 IGLV3-12A0A075B6K2 115 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 TRBV2A0A0J9YWF9 115 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 OR6C70A6NIJ9 312 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 OR6C76A6NM76 312 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 PRR32B1ATL7 298 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 OR6A2O95222 327 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 ACTC1P68032 377 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 ACTA1P68133 377 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 FOXK1P85037 733 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 ARMC4Q5T2S8 1044 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 UTS2BQ765I0 119 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 FAM122BQ7Z309 247 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 ZNF554Q86TJ5 538 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms