RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 APOOLQ6UXV4 268 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 PEG10Q86TG7 708 aaKnown RBP13.42□□□□□ -0.26
CNOT9-201ENST00000273064 CRIPAKQ8N1N5 446 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 CA13Q8N1Q1 262 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 CLDN22Q8N7P3 220 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 C19orf43Q9BQ61 176 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 RBM24Q9BX46 236 aaKnown RBP13.42□□□□□ -0.26
CNOT9-201ENST00000273064 MED11Q9P086 117 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 NCDNQ9UBB6 729 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 ZNF337Q9Y3M9 751 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 WDR90Q96KV7 1748 aa13.42□□□□□ -0.26
CNOT9-201ENST00000273064 M0R233 179 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 SRPX2O60687 465 aaPredicted RBP13.41□□□□□ -0.26
CNOT9-201ENST00000273064 CYB5AP00167 134 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 MEP1BQ16820 701 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 ARHGAP11BQ3KRB8 267 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 OR2S2Q9NQN1 319 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 ZSCAN5BA6NJL1 495 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 NUPL2O15504 423 aaKnown RBP13.41□□□□□ -0.26
CNOT9-201ENST00000273064 AMY2AP04746 511 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 MAPK3P27361 379 aaPredicted RBP13.41□□□□□ -0.26
CNOT9-201ENST00000273064 DGCR2P98153 550 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 SRYQ05066 204 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 CAMK2DQ13557 499 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 BEX5Q5H9J7 111 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 NIPAL3Q6P499 406 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 CBLN3Q6UW01 205 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 SIAH3Q8IW03 269 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 SHDQ96IW2 340 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 SPACA5Q96QH8 159 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 FBRSQ9HAH7 460 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 VWA8A3KMH1 1905 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 SHISA8B8ZZ34 492 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 FABP7O15540 132 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 PRICKLE3O43900 615 aaPredicted RBP13.41□□□□□ -0.26
CNOT9-201ENST00000273064 CEBPGP53567 150 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 UBE2MP61081 183 aaKnown RBP13.41□□□□□ -0.26
CNOT9-201ENST00000273064 EEF1A2Q05639 463 aaKnown RBP13.41□□□□□ -0.26
CNOT9-201ENST00000273064 WBP2NLQ6ICG8 309 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 NDUFAF7Q7L592 441 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 ACOT12Q8WYK0 555 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 KLHL15Q96M94 604 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 OR51J1Q9H342 316 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 LHX9Q9NQ69 397 aa13.41□□□□□ -0.26
CNOT9-201ENST00000273064 RBFOX1Q9NWB1 397 aaKnown RBP13.41□□□□□ -0.26
CNOT9-201ENST00000273064 CHP2O43745 196 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 ALDOBP05062 364 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 AKR1C4P17516 323 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 CRYBB2P43320 205 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 POU4F2Q12837 409 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 POU4F3Q15319 338 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 OR10K2Q6IF99 312 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 EID2Q8N6I1 236 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 GALNT11Q8NCW6 608 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 TCTN2Q96GX1 697 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 SLC25A44Q96H78 314 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 PTGES2Q9H7Z7 377 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 REV1Q9UBZ9 1251 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 TMEM14AQ9Y6G1 99 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 C5orf42Q9H799 3197 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 TRDV1A0A1B0GX56 115 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 METTL21EPA6NDL7 271 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 EEF1E1-BLOC1S5C9J1V9 151 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 SIX6O95475 246 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 ARSBP15848 533 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 FRKP42685 505 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 CXCL12P48061 93 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 C9orf135Q5VTT2 229 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 GLT8D1Q68CQ7 371 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 DNM1P34Q6PK57 102 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 SHISA5Q8N114 240 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 GPR148Q8TDV2 347 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 RNF170Q96K19 258 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 OR6C1Q96RD1 312 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 ZNF701Q9NV72 531 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 OBP2AQ9NY56 170 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 TRBV11-1A0A0K0K1C0 115 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 BCAT2O15382 392 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 PEBP1P30086 187 aaKnown RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 HMGA2P52926 109 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 SF3A2Q15428 464 aaKnown RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 COMTD1Q86VU5 262 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 LRRC28Q86X40 367 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 ZNF595Q8IYB9 648 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 ACBD4Q8NC06 268 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 C17orf47Q8NEP4 570 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 SUN5Q8TC36 379 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 WDR34Q96EX3 536 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 ELMOD3Q96FG2 381 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 INIPQ9NRY2 104 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 CGGBP1Q9UFW8 167 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-201ENST00000273064 DOCK7Q96N67 2140 aa13.4□□□□□ -0.26
CNOT9-201ENST00000273064 TMEM129A0AVI4 362 aa13.39□□□□□ -0.27
CNOT9-201ENST00000273064 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
CNOT9-201ENST00000273064 DVL2O14641 736 aa13.39□□□□□ -0.27
CNOT9-201ENST00000273064 TGM1P22735 817 aa13.39□□□□□ -0.27
CNOT9-201ENST00000273064 GDNFP39905 211 aa13.39□□□□□ -0.27
CNOT9-201ENST00000273064 AKR1D1P51857 326 aa13.39□□□□□ -0.27
CNOT9-201ENST00000273064 DUSP8Q13202 625 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms