RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SLC3A1Q07837 685 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 HSD17B12Q53GQ0 312 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 NKAIN2Q5VXU1 208 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 TRIQKQ629K1 86 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 GPR139Q6DWJ6 353 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 MAMSTRQ6ZN01 415 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 SLC25A45Q8N413 288 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 BMPERQ8N8U9 685 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 OR13C5Q8NGS8 318 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 YIPF5Q969M3 257 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 TAAR8Q969N4 342 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 DERL3Q96Q80 235 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ABHD1Q96SE0 405 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ALG12Q9BV10 488 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 RERGLQ9H628 205 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 TAS2R5Q9NYW4 299 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 TEX13CA0A0J9YWL9 993 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ELOA3DA6NLF2 546 aaPredicted RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 DPP4P27487 766 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 RAG2P55895 527 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 RPL6Q02878 288 aaKnown RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 GPR176Q14439 515 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 KCNAB1Q14722 419 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ELOA3BQ3SY89 546 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 FAM199XQ6PEV8 388 aaPredicted RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 SPEM1Q8N4L4 309 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ELOA3Q8NG57 546 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 KTI12Q96EK9 354 aaPredicted RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 MRI1Q9BV20 369 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 RBMX2Q9Y388 322 aaKnown RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 MT-ATP6P00846 226 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ERVK-25P63136 954 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 UBE2NLQ5JXB2 153 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 CDH24Q86UP0 819 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 PLXDC1Q8IUK5 500 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 C7orf50Q9BRJ6 194 aaKnown RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 THAP7Q9BT49 309 aaPredicted RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 MRM2Q9UI43 246 aaKnown RBP10.13□□□□□ -0.79
MSH3-201ENST00000265081 CAMK2AQ9UQM7 478 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 KLHDC2Q9Y2U9 406 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ZNF281Q9Y2X9 895 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 ALG5Q9Y673 324 aa10.13□□□□□ -0.79
MSH3-201ENST00000265081 A0A1W2PRG6 482 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 NPIPB13A6NJU9 1138 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 NPIPB4C9JG80 1138 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 OR2B3O76000 313 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 DXOO77932 396 aaKnown RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 AQP2P41181 271 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 RPL18Q07020 188 aaKnown RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 CDK10Q15131 360 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 QPRTQ15274 297 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 CARTPTQ16568 116 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 TATDN3Q17R31 274 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 TBRG1Q3YBR2 411 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 ALG10Q5BKT4 473 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 GPR135Q8IZ08 494 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 ZNF614Q8N883 585 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 C19orf18Q8NEA5 215 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 NFAM1Q8NET5 270 aaPredicted RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 MRPS17Q9Y2R5 130 aaKnown RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 A0A1B0GX78 115 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 ZNF879B4DU55 563 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 PSKH1P11801 424 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 FOLR1P15328 257 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 OR1D5P58170 312 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 NNATQ16517 81 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 OR5H6Q8NGV6 325 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 RFT1Q96AA3 541 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 SCMH1Q96GD3 660 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 ABCG5Q9H222 651 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 SOHLH2Q9NX45 425 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 TRAV36DV7A0A075B6V5 113 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 LY6G6EA0A0G2JKS1 128 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 C4orf47A7E2U8 309 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 AIPO00170 330 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 HOXD12P35452 270 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 ACVR1BP36896 505 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 GRK6P43250 576 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 KLF9Q13886 244 aaPredicted RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 NDUFA5Q16718 116 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 LRRTM1Q86UE6 522 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 METTL27Q8N6F8 245 aaPredicted RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 LSM14AQ8ND56 463 aaKnown RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 Q96M85 177 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 SLC22A11Q9NSA0 550 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 CA14Q9ULX7 337 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 U3KQA8 63 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 DUX1O43812 170 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 SRMP19623 302 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 DYRK1AQ13627 763 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 RSBN1Q5VWQ0 802 aaPredicted RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 LEG1Q6P5S2 330 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 NTNG2Q96CW9 530 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 VN1R1Q9GZP7 353 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 TP63Q9H3D4 680 aaPredicted RBP10.12□□□□□ -0.79
MSH3-201ENST00000265081 NIPAL2Q9H841 368 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 ZNF304Q9HCX3 659 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 NANSQ9NR45 359 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 RXFP3Q9NSD7 469 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms