RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 A0A0B4J2E0 115 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 A0A1B0GX12 115 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 PTP4A3O75365 173 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 ITGA10O75578 1167 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 LYPD3O95274 346 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 CTSBP07858 339 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF35P13682 527 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SPI1P17947 270 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 M6PRP20645 277 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF10P21506 573 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 NUP62P37198 522 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 PPP1CAP62136 330 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 POU4F2Q12837 409 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 HACD4Q5VWC8 232 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 JAZF1Q86VZ6 243 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SAMD14Q8IZD0 417 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 OR6N2Q8NGY6 317 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 THEM6Q8WUY1 208 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 HGDQ93099 445 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SPACA7Q96KW9 195 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SYNDIG1Q9H7V2 258 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 AKAP7Q9P0M2 348 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 LOC100509620A0A075B734 347 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 hCG_1807616A0A1W2PRN6 198 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 UBE2QL1A1L167 161 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 PYCARD-AS1I3L0S3 204 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 BRINP1O60477 761 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 HLA-DQA2P01906 255 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 LIPCP11150 499 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 NFYAP23511 347 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-201ENST00000263856 AQP2P41181 271 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 P2RX1P51575 399 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 MFSD13AQ14CX5 517 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 ZNHIT3Q15649 155 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-201ENST00000263856 LRRC37A5PQ49AS3 106 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 C4orf46Q504U0 113 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 CFAP77Q6ZQR2 320 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 TMED4Q7Z7H5 227 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF676Q8N7Q3 588 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 CAMKVQ8NCB2 501 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 OR9A4Q8NGU2 314 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 OR2A5Q96R48 311 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 ELF4Q99607 663 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-201ENST00000263856 GFI1Q99684 422 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-201ENST00000263856 OR5V1Q9UGF6 321 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 DTX4Q9Y2E6 619 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 PRR32B1ATL7 298 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 ATP6V1G2-DDX39BF2Z307 99 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 G3V3Q6 166 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 GABARAPH6UMI1 98 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 GPR75O95800 540 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 CSTAP01040 98 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 HNRNPA1P09651 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHMP3-201ENST00000263856 ART1P52961 327 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 DYRK1AQ13627 763 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 CBFBQ13951 182 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 CEBPEQ15744 281 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 USP53Q70EK8 1073 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 OR10AC1Q8NH08 325 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 NARS2Q96I59 477 aaKnown RBP11.35□□□□□ -0.59
CHMP3-201ENST00000263856 ACTR10Q9NZ32 417 aa11.35□□□□□ -0.59
CHMP3-201ENST00000263856 PDCD5O14737 125 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 APODP05090 189 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 PTH2RP49190 550 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 MAT1AQ00266 395 aaKnown RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 GPR18Q14330 331 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 ATXN7L3Q14CW9 347 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 FAM69AQ5T7M9 428 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 PRSS42Q7Z5A4 293 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 RELL2Q8NC24 303 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 OR4D10Q8NGI6 311 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 DUSP22Q9NRW4 184 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 PTTG3PQ9NZH4 202 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 LRIT1Q9P2V4 623 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 PFDN2Q9UHV9 154 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF281Q9Y2X9 895 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 AIPO00170 330 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 OGG1O15527 345 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 RP2O75695 350 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 ECDO95905 644 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 GNRH1P01148 92 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 IGKV1D-16P01601 117 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 IFNA16P05015 189 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 C5AR1P21730 350 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 GDI1P31150 447 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 TSFMP43897 325 aaKnown RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 TAS2R20P59543 309 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 GAS6Q14393 721 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 C2orf68Q2NKX9 166 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 OVCH1Q7RTY7 1134 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 OR51A4Q8NGJ6 313 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 HAVCR2Q8TDQ0 301 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 TSEN15Q8WW01 171 aaKnown RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 ZFYVE21Q9BQ24 234 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 ALG12Q9BV10 488 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms