RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SLC35A3Q9Y2D2 325 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 OR5K3A6NET4 321 aa11.9□□□□□ -0.51
SNX1-201ENST00000261889 CACNB4O00305 520 aaPredicted RBP11.9□□□□□ -0.51
SNX1-201ENST00000261889 KRT33AO76009 404 aa11.9□□□□□ -0.51
SNX1-201ENST00000261889 CTNNB1P35222 781 aa11.9□□□□□ -0.51
SNX1-201ENST00000261889 NRG3P56975 720 aa11.9□□□□□ -0.51
SNX1-201ENST00000261889 MAT1AQ00266 395 aaKnown RBP11.9□□□□□ -0.51
SNX1-201ENST00000261889 MUC20Q8N307 709 aaPredicted RBP11.9□□□□□ -0.51
SNX1-201ENST00000261889 OR4K14Q8NGD5 310 aa11.9□□□□□ -0.51
SNX1-201ENST00000261889 REG4Q9BYZ8 158 aa11.9□□□□□ -0.51
SNX1-201ENST00000261889 NCDNQ9UBB6 729 aa11.9□□□□□ -0.51
SNX1-201ENST00000261889 GPR34Q9UPC5 381 aa11.9□□□□□ -0.51
SNX1-201ENST00000261889 PCDHGA9Q9Y5G4 932 aaKnown RBP11.9□□□□□ -0.51
SNX1-201ENST00000261889 FAM186AA6NE01 2351 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TYRP1P17643 537 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 DDX6P26196 483 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNX1-201ENST00000261889 PRKAR1BP31321 381 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 GBX2P52951 348 aaPredicted RBP11.89□□□□□ -0.51
SNX1-201ENST00000261889 RIN1Q13671 783 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 KIRREL2Q6UWL6 708 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 PXKQ7Z7A4 578 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 GPAT4Q86UL3 456 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 RTN4RL2Q86UN3 420 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 PLPP7Q8NBV4 271 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 OR52H1Q8NGJ2 320 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 WBP1Q96G27 269 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 ZNF514Q96K75 400 aaPredicted RBP11.89□□□□□ -0.51
SNX1-201ENST00000261889 MS4A4EQ96PG1 132 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 C19orf43Q9BQ61 176 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 BAIAP2Q9UQB8 552 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3DA0A087WVF3 549 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3IA0A087WXS9 549 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3EA0A087X179 549 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3KA0A087X1G2 549 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 C17orf113A0A1B0GUU1 675 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3FA6NER0 549 aaPredicted RBP11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3LB9A6J9 549 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TOR1AO14656 332 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 KHNYNO15037 678 aaKnown RBP11.89□□□□□ -0.51
SNX1-201ENST00000261889 VEGFDO43915 354 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3HP0C7X1 549 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 AQP2P41181 271 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 CSRP2Q16527 193 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 SCGB2B2Q4G0G5 96 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3GQ6DHY5 549 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3CQ6IPX1 549 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 GPALPP1Q8IXQ4 340 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TBC1D3Q8IZP1 549 aaPredicted RBP11.89□□□□□ -0.51
SNX1-201ENST00000261889 SPPL3Q8TCT6 385 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 SMIM19Q96E16 107 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 SPACA7Q96KW9 195 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 FAM83CQ9BQN1 747 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 FREM3P0C091 2139 aa11.89□□□□□ -0.51
SNX1-201ENST00000261889 TRAV18A0A075B6X5 111 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 IFITM5A6NNB3 132 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 MCRIP1C9JLW8 97 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 WISP1O95388 367 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 NFATC1O95644 943 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 RPN2P04844 631 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 FOXL2P58012 376 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 TDGQ13569 410 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 LEG1Q6P5S2 330 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 MDGA2Q7Z553 956 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 OR4C16Q8NGL9 310 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 C10orf90Q96M02 699 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 PBX4Q9BYU1 374 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 PPA2Q9H2U2 334 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 PRR13Q9NZ81 148 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 ATXN7L1Q9ULK2 861 aaPredicted RBP11.88□□□□□ -0.51
SNX1-201ENST00000261889 C2orf16Q68DN1 1984 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 ASPMQ8IZT6 3477 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 KIF26BQ2KJY2 2108 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 SYT5O00445 386 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 CREBL2O60519 120 aaPredicted RBP11.88□□□□□ -0.51
SNX1-201ENST00000261889 IGKV1D-16P01601 117 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 GAS6Q14393 721 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 TMUB2Q71RG4 321 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 ASPGQ86U10 573 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 SLITRK4Q8IW52 837 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 ZFP82Q8N141 532 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 OR52R1Q8NGF1 315 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 NUP210Q8TEM1 1887 aaPredicted RBP11.88□□□□□ -0.51
SNX1-201ENST00000261889 THEM6Q8WUY1 208 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 CNN2Q99439 309 aaKnown RBP11.88□□□□□ -0.51
SNX1-201ENST00000261889 WDR13Q9H1Z4 485 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
SNX1-201ENST00000261889 ZNF768Q9H5H4 540 aaKnown RBP11.88□□□□□ -0.51
SNX1-201ENST00000261889 C11orf98E9PRG8 122 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 STX11O75558 287 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 RCBTB2O95199 551 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 CD3DP04234 171 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 GTF2F2P13984 249 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 NAGAP17050 411 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 CFL1P23528 166 aaKnown RBP11.88□□□□□ -0.51
SNX1-201ENST00000261889 ACTR1BP42025 376 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 ACTR1AP61163 376 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 NHLRC3Q5JS37 347 aa11.88□□□□□ -0.51
SNX1-201ENST00000261889 BIVMQ86UB2 503 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms