RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 C9orf106Q8NAJ2 232 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 OR4K5Q8NGD3 323 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 OR10D3Q8NH80 312 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 OR2V1Q8NHB1 315 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 GNPDA2Q8TDQ7 276 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 SLC25A43Q8WUT9 341 aaPredicted RBP10.36□□□□□ -0.75
PFDN1-201ENST00000261813 FEVQ99581 238 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 TMEM43Q9BTV4 400 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 DGCR6LQ9BY27 220 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 OR11A1Q9GZK7 315 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 KRT84Q9NSB2 600 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 MAN2C1Q9NTJ4 1040 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 VNN3Q9NY84 501 aa10.36□□□□□ -0.75
PFDN1-201ENST00000261813 SPIN1Q9Y657 262 aaPredicted RBP10.36□□□□□ -0.75
PFDN1-201ENST00000261813 A0A087WUU8 490 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 TRBV4-1A0A0J9YWV2 114 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 ZC3H12DA2A288 527 aaKnown RBP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 MBD3L4A6NDZ8 208 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 MBD3L3A6NE82 208 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 WIPF3A6NGB9 483 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 MBD3L5A6NJ08 208 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 GJE1A6NN92 205 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 ZNF208O43345 1280 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 CXCL13O43927 109 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 TGM6O95932 706 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 GSK3AP49840 483 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 CTBP2P56545 445 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 PON3Q15166 354 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 SF3B4Q15427 424 aaKnown RBP eCLIP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 TTC23Q5W5X9 447 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 KDM4DQ6B0I6 523 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 HBMQ6B0K9 141 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 ZNF770Q6IQ21 691 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 CD300LDQ6UXZ3 194 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 CHMP1BQ7LBR1 199 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 TMEM179BQ7Z7N9 219 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 PARP8Q8N3A8 854 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 AQP11Q8NBQ7 271 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 NAXEQ8NCW5 288 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 ZNF555Q8NEP9 628 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 MBD3L2Q8NHZ7 208 aaPredicted RBP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 SSC4DQ8WTU2 575 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 OSTF1Q92882 214 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 DNAJA3Q96EY1 480 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 ARL5BQ96KC2 179 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 SLC29A1Q99808 456 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 PRSS27Q9BQR3 290 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 TACO1Q9BSH4 297 aaKnown RBP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 ZNF426Q9BUY5 554 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 SRXN1Q9BYN0 137 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 CALHM2Q9HA72 323 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 PAPOLBQ9NRJ5 636 aaKnown RBP10.35□□□□□ -0.75
PFDN1-201ENST00000261813 RAB26Q9ULW5 256 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 LRRC42Q9Y546 428 aa10.35□□□□□ -0.75
PFDN1-201ENST00000261813 USP9XQ93008 2570 aaPredicted RBP10.34□□□□□ -0.75
PFDN1-201ENST00000261813 UNC79Q9P2D8 2635 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 A0A0G2JNJ9 132 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 H0YAE9 185 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 LYPD3O95274 346 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 THY1P04216 161 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 ACADSP16219 412 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 CD33P20138 364 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 PRKACGP22612 351 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 CBLP22681 906 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 CEACAM8P31997 349 aaPredicted RBP10.34□□□□□ -0.75
PFDN1-201ENST00000261813 TIMP3P35625 211 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 CLK1P49759 484 aaKnown RBP10.34□□□□□ -0.75
PFDN1-201ENST00000261813 PER3P56645 1201 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 ESRRGP62508 458 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 PRKCDQ05655 676 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 PPP1R8Q12972 351 aaKnown RBP10.34□□□□□ -0.75
PFDN1-201ENST00000261813 TSPAN31Q12999 210 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 SGCBQ16585 318 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 ANKDD1AQ495B1 522 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 PDSS1Q5T2R2 415 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 RIPPLY2Q5TAB7 128 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 HIST2H2BCQ6DN03 193 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 RPL13AP3Q6NVV1 102 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 MTFR2Q6P444 385 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 TBPL2Q6SJ96 375 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 C1orf229Q6ZS94 237 aaPredicted RBP10.34□□□□□ -0.75
PFDN1-201ENST00000261813 TMPRSS11FQ6ZWK6 438 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 NKAIN4Q8IVV8 208 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 SLC43A2Q8N370 569 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 DHRSXQ8N5I4 330 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 FNDC9Q8TBE3 224 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 STK35Q8TDR2 534 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 ITLN2Q8WWU7 325 aaPredicted RBP10.34□□□□□ -0.75
PFDN1-201ENST00000261813 RND1Q92730 232 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 OR5B2Q96R09 309 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 TEX12Q9BXU0 123 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 UCK2Q9BZX2 261 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 NDEL1Q9GZM8 345 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 SMURF2Q9HAU4 748 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 Q9UFV3 132 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 RNF6Q9Y252 685 aa10.34□□□□□ -0.75
PFDN1-201ENST00000261813 IGKV1D-42A0A075B6H8 117 aa10.33□□□□□ -0.76
PFDN1-201ENST00000261813 SLC22A20A6NK97 555 aa10.33□□□□□ -0.76
PFDN1-201ENST00000261813 A8MVM7 634 aa10.33□□□□□ -0.76
PFDN1-201ENST00000261813 OR2T1O43869 369 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms