RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 FAM86C2PA6NEL3 165 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 UNC119BA6NIH7 251 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 H0YGG7 62 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 BHLHE40O14503 412 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 NUPL2O15504 423 aaKnown RBP9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 NDUFB6O95139 128 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 IGHV4-34P06331 123 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 SBK2P0C263 348 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 CTSEP14091 401 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 GMFBP60983 142 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 ARF3P61204 181 aaPredicted RBP9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 ZNF85Q03923 595 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 SCRN3Q0VDG4 424 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 RUNX2Q13950 521 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 PDSS1Q5T2R2 415 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 APOOLQ6UXV4 268 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 LINGO2Q7L985 606 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 TAF8Q7Z7C8 310 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 TDHQ8IZJ6 230 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 LNX2Q8N448 690 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 CDRT4Q8N9R6 151 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 C17orf47Q8NEP4 570 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 OR7G2Q8NG99 324 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 OR6K3Q8NGY3 331 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 ZNF671Q8TAW3 534 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 C4orf36Q96KX1 117 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 TBX5Q99593 518 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 TEAD3Q99594 435 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 MCHR1Q99705 422 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 DUSP22Q9NRW4 184 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 HRASLS2Q9NWW9 162 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC39A1Q9NY26 324 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 NDRG3Q9UGV2 375 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 IL20RAQ9UHF4 553 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 ST6GALNAC2Q9UJ37 374 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 GPR160Q9UJ42 338 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 CLEC4AQ9UMR7 237 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 GPR55Q9Y2T6 319 aaPredicted RBP9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 WDR45Q9Y484 360 aa9.92□□□□□ -0.82
CHRNA1-201ENST00000261007 FANCMQ8IYD8 2048 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 TCRBV16S1A1N1A0A5B0 115 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 J3QLW9 94 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 P2RX6O15547 441 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 ZNF217O75362 1048 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 ZGLP1P0C6A0 271 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 ZNF19P17023 458 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 MNDAP41218 407 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 RGS8P57771 180 aaPredicted RBP9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 MAT1AQ00266 395 aaKnown RBP9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 POU4F2Q12837 409 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 DUSP8Q13202 625 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 LTB4RQ15722 352 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 MPPED2Q15777 294 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 TMEM255AQ5JRV8 349 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 C6orf132Q5T0Z8 1188 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 UNQ9370/PRO34162Q6UXP9 181 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 DGLUCYQ7Z3D6 616 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 VRK2Q86Y07 508 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 RNF113BQ8IZP6 322 aaKnown RBP9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 CSNK1A1LQ8N752 337 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 OR52I2Q8NH67 350 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 LGALS14Q8TCE9 139 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 ADAMTS18Q8TE60 1221 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 ZDHHC1Q8WTX9 485 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC35A4Q96G79 324 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 CCDC3Q9BQI4 270 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 ARL6Q9H0F7 186 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 OR52D1Q9H346 318 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 C6orf106Q9H6K1 298 aaPredicted RBP9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 NRIP3Q9NQ35 241 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC2A4RGQ9NR83 387 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 CMC2Q9NRP2 79 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 OPN4Q9UHM6 478 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 ZNF443Q9Y2A4 671 aaPredicted RBP9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 MTCH2Q9Y6C9 303 aa9.91□□□□□ -0.82
CHRNA1-201ENST00000261007 A0A1W2PPC4 97 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 UBE2QL1A1L167 161 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 CDHR4A6H8M9 788 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 CDC42EP2O14613 210 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 PIP5K1CO60331 668 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 KHDRBS3O75525 346 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 GPR75O95800 540 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 APOC3P02656 99 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 THY1P04216 161 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 DBIP07108 87 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 GUSBP08236 651 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 THEGLP0DJG4 465 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 BMP7P18075 431 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 ACVR1BP36896 505 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 RAB38P57729 211 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 SIM1P81133 766 aaPredicted RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 FGL1Q08830 312 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 PUS10Q3MIT2 529 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 EXOSC6Q5RKV6 272 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 ZNF660Q6AZW8 331 aaPredicted RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 FAM199XQ6PEV8 388 aaPredicted RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 ATRAIDQ6UW56 229 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 FRRS1Q6ZNA5 592 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 340.4 ms