RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 RYR1P21817 5038 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 PROP1O75360 226 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 SERPINI2O75830 405 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 AKR7A3O95154 331 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 JMJD7P0C870 316 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 SPNP16150 400 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 HIST1H1CP16403 213 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 ENPP1P22413 925 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 GADD45AP24522 165 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CNR2P34972 360 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CD96P40200 585 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 RFX2P48378 723 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 RAB25P57735 213 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CDK6Q00534 326 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 GARNL3Q5VVW2 1013 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 SLX4IPQ5VYV7 408 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CFAP77Q6ZQR2 320 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 ZBTB46Q86UZ6 589 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 GPR135Q8IZ08 494 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 TBC1D15Q8TC07 691 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 MOAP1Q96BY2 351 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF845Q96IR2 970 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 ACOT13Q9NPJ3 140 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CRNNQ9UBG3 495 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 LHX6Q9UPM6 363 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 LHFPL6Q9Y693 200 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 TRAV27A0A087WT01 109 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 SAGE2PA6NJ88 616 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CLCA1A8K7I4 914 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 TSPAN9O75954 239 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 IGLV2-14P01704 120 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 DCKP27707 260 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 ALDH3A2P51648 485 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 MRGPRG-AS1Q2M3A8 158 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 ZBTB37Q5TC79 503 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 NANOGNBQ7Z5D8 188 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 STK32CQ86UX6 486 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 TMEM126BQ8IUX1 230 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 EPYCQ99645 322 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 DPYSL5Q9BPU6 564 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 MBD2Q9UBB5 411 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 GSTK1Q9Y2Q3 226 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC25A12O75746 678 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 GATBO75879 557 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 TNFP01375 233 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 MYL12AP19105 171 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 UQCRC2P22695 453 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 BCAP31P51572 246 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 MAPK12P53778 367 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 RAB14P61106 215 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 TLE3Q04726 772 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 Q5BKY6 102 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 HES3Q5TGS1 186 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 FIP1L1Q6UN15 594 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 PLEKHG7Q6ZR37 379 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 VASH2Q86V25 355 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 C10orf53Q8N6V4 93 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 OR5P2Q8WZ92 322 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 DGAT2Q96PD7 388 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 MAGIXQ9H6Y5 334 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 LEF1Q9UJU2 399 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF780BQ9Y6R6 833 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 TXNDC12O95881 172 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 CLEC2LP0C7M8 214 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ADORA3P0DMS8 318 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 S100A7P31151 101 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 FAUP35544 74 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 RFC3P40938 356 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 CASP6P55212 293 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 AP3S2P59780 193 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 CDC42P60953 191 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 NPRL3Q12980 569 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TAF13Q15543 124 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TMEM35AQ53FP2 167 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 THOC7Q6I9Y2 204 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TAF8Q7Z7C8 310 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ODF3L1Q8IXM7 274 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 B3GNT7Q8NFL0 401 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 RGMAQ96B86 450 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 GINS4Q9BRT9 223 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 PLCXD1Q9NUJ7 323 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TRAV8-7A0A075B6U6 113 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 OR5K4A6NMS3 321 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 GYPBP06028 91 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 VHLP40337 213 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ABATP80404 500 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 IL18R1Q13478 541 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ENDOGQ14249 297 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 C3AR1Q16581 482 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF74Q16587 644 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 CCNYL2Q5T2Q4 361 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 MFSD4BQ5TF39 518 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 GKN2Q86XP6 184 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 MCEMP1Q8IX19 187 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF295-AS1Q8N0V1 137 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 VWA5B2Q8N398 1253 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 OR2Y1Q8NGV0 311 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 SNX33Q8WV41 574 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 C5orf30Q96GV9 206 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms