RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CDC42P60953 191 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 BATFQ16520 125 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 MEP1BQ16820 701 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF667Q5HYK9 610 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 IDNKQ5T6J7 187 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 OR2A2Q6IF42 318 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 LRRC55Q6ZSA7 311 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM156Q8N614 296 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 OR9K2Q8NGE7 335 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 OR9Q2Q8NGE9 314 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 OR14L1PQ8NHC6 308 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 RAB40AQ8WXH6 277 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 KCTD15Q96SI1 283 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-201ENST00000258733 RHNO1Q9BSD3 238 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 LAT2Q9GZY6 243 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 MEGF9Q9H1U4 602 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 ACKR4Q9NPB9 350 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 RNF150Q9ULK6 438 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 MEGF6O75095 1541 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 A0A087WZY1 265 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 SGK494L7N484 410 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 ARPC3O15145 178 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 FAM20BO75063 409 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 AMBPP02760 352 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 APODP05090 189 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 NR2F6P10588 404 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 FCER1AP12319 257 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 SELENOPP49908 381 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 OSTNP61366 133 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 ARHGAP15Q53QZ3 475 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 GFI1BQ5VTD9 330 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 TAS1R1Q7RTX1 841 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 ZFP41Q8N8Y5 198 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 OR2Z1Q8NG97 314 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 OR7G2Q8NG99 324 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 OR56A4Q8NGH8 313 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 SLC25A28Q96A46 364 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 RNFT2Q96EX2 444 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 TECTBQ96PL2 329 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 WDR83Q9BRX9 315 aaKnown RBP7.12□□□□□ -1.27
GPNMB-201ENST00000258733 PKIBQ9C010 78 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 USP36Q9P275 1121 aaKnown RBP7.12□□□□□ -1.27
GPNMB-201ENST00000258733 AMDHD2Q9Y303 409 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 QSER1Q2KHR3 1735 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 PPIAL4EA0A075B759 164 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 PPIAL4CA0A0B4J2A2 164 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 IGHV2-70DA0A0C4DH43 119 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.12□□□□□ -1.27
GPNMB-201ENST00000258733 SHISA8B8ZZ34 492 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 PPIAL4DF5H284 164 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 NEMP1O14524 444 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 ARPC1BO15143 372 aaKnown RBP7.12□□□□□ -1.27
GPNMB-201ENST00000258733 IGSF6O95976 241 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 MT-ND1P03886 318 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 PPIAL4FP0DN26 164 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 FUT1P19526 365 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 ARRB2P32121 409 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 DCTDP32321 178 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 FOXL2P58012 376 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 ZP1P60852 638 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 TIGD5Q53EQ6 642 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 TFDP3Q5H9I0 405 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 NKAPLQ5M9Q1 402 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 TREML2Q5T2D2 321 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 TPTE2P1Q5T6R2 138 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 LGSNQ5TDP6 509 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 GGNBP1Q5YKI7 109 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF57Q68EA5 555 aaPredicted RBP7.12□□□□□ -1.27
GPNMB-201ENST00000258733 KIAA0895LQ68EN5 471 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 PRR27Q6MZM9 219 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 GAREM2Q75VX8 874 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 PARGQ86W56 976 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 LINC00346Q8IVM7 164 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF100Q8IYN0 542 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 C1orf87Q8N0U7 546 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 OR1S2Q8NGQ3 325 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 RAD54LQ92698 747 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 AKR1E2Q96JD6 320 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 SLC35E1Q96K37 410 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 GPN1Q9HCN4 374 aaPredicted RBP7.12□□□□□ -1.27
GPNMB-201ENST00000258733 SIX2Q9NPC8 291 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 COL14A1Q05707 1796 aaKnown RBP7.12□□□□□ -1.27
GPNMB-201ENST00000258733 KIAA1551Q9HCM1 1747 aa7.12□□□□□ -1.27
GPNMB-201ENST00000258733 LOC100289279A0A1B0GTE1 492 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 TRAPPC13A5PLN9 417 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 ANKRD61A6NGH8 418 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 A8MVM7 634 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 TBX19O60806 448 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 PSMD10O75832 226 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 OR6A2O95222 327 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 FARS2O95363 451 aaKnown RBP7.11□□□□□ -1.27
GPNMB-201ENST00000258733 WNT11O96014 354 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 FABP3P05413 133 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 MAGEA3P43357 314 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 CXCR3P49682 368 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 RAB28P51157 221 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 CKS1BP61024 79 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 PTSQ03393 145 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 MELKQ14680 651 aa7.11□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF697Q5TEC3 545 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms