RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 T-ENOLP0DO92 83 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 MTHFD2P13995 350 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 GABRA5P31644 462 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 LSAMPQ13449 338 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 AADACL4Q5VUY2 407 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 PAPD4Q6PIY7 484 aaKnown RBP8.07□□□□□ -1.12
PTCD3-201ENST00000254630 PFN4Q8NHR9 129 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 ADAMTS14Q8WXS8 1223 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 ELP4Q96EB1 424 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 NEURL3Q96EH8 262 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 UBXN10Q96LJ8 280 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 TNFRSF13CQ96RJ3 184 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 ALG12Q9BV10 488 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 SLAMF8Q9P0V8 285 aa8.07□□□□□ -1.12
PTCD3-201ENST00000254630 ARPC5O15511 151 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 KLKB1P03952 638 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 HLA-DMAP28067 261 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 MTCP1P56278 107 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 EMX1Q04741 257 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 MFGE8Q08431 387 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 GAB1Q13480 694 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 AADACL3Q5VUY0 350 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 DESI1Q6ICB0 168 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF784Q8NCA9 323 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 GOT1L1Q8NHS2 421 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 NT5C3BQ969T7 300 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 MRPS28Q9Y2Q9 187 aaKnown RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 RGPD4Q7Z3J3 1758 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 CTNSO60931 367 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 ELAVL4P26378 380 aaKnown RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 CLDN6P56747 220 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 RAB5BP61020 215 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 LEXMQ3ZCV2 418 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 AFMIDQ63HM1 303 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 PGAP1Q75T13 922 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 KHSRPQ92945 711 aaKnown RBP eCLIP8.06□□□□□ -1.122e-7■■■□□ 14.9
PTCD3-201ENST00000254630 OR51J1Q9H342 316 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 NT5DC2Q9H857 520 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 ANKRD10Q9NXR5 420 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 MMP17Q9ULZ9 603 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 SURF4O15260 269 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 RAB40ALP0C0E4 278 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 TPT1P13693 172 aaKnown RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 CD79BP40259 229 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 CYB561P49447 251 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 IL13RA1P78552 427 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 GPR155Q7Z3F1 870 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 STK35Q8TDR2 534 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 RAB40AQ8WXH6 277 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 H1FXQ92522 213 aaKnown RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 NIPAL2Q9H841 368 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 NRIP3Q9NQ35 241 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 FUOMA2VDF0 154 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 KRBA1A5PL33 1030 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 TNFRSF10AO00220 468 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 TOR1AO14656 332 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 CSO75390 466 aaKnown RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 RFPL3O75679 317 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 MSL3P1P0C860 447 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 OR8G3PP0DMU2 310 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 CPT2P23786 658 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 RPS18P62269 152 aaKnown RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 HTD2P86397 168 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 SLC35D2Q76EJ3 337 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 PBX4Q9BYU1 374 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 P2RY12Q9H244 342 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 FGF21Q9NSA1 209 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 SDHAF2Q9NX18 166 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 CEPT1Q9Y6K0 416 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 A0A1W2PPH5 198 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 P2RY10O00398 339 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 GAPDHSO14556 408 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 LILRB5O75023 590 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 PTGER4P35408 488 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 IL10RAQ13651 578 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 MSMO1Q15800 293 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 PYCR3Q53H96 274 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 PM20D2Q8IYS1 436 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 LINC01465Q8N7H1 131 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 OR56B1Q8NGI3 324 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 ZFP90Q8TF47 636 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 ANKRD9Q96BM1 317 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-201ENST00000254630 SMIM3Q9BZL3 60 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 B3GAT1Q9P2W7 334 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 MYOTQ9UBF9 498 aa8.06□□□□□ -1.12
PTCD3-201ENST00000254630 ANKRD34BA5PLL1 514 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 MCRIP1C9JLW8 97 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 PLRG1O43660 514 aaKnown RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SERPINA7P05543 415 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 UBCP0CG48 685 aaKnown RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SELEP16581 610 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 NKX2-5P52952 324 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 GRB2P62993 217 aaKnown RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 GABREP78334 506 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF674Q2M3X9 581 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 METRNLQ641Q3 311 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 S100A7AQ86SG5 101 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 HAS2Q92819 552 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 UPRTQ96BW1 309 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms