RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 NUDT22Q9BRQ3 303 aa17.02■□□□□ 0.32
PDLIM4-201ENST00000253754 TMEM43Q9BTV4 400 aa17.02■□□□□ 0.32
PDLIM4-201ENST00000253754 MMP25Q9NPA2 562 aa17.02■□□□□ 0.32
PDLIM4-201ENST00000253754 NPAP1Q9NZP6 1156 aa17.02■□□□□ 0.32
PDLIM4-201ENST00000253754 A0A087WV48 116 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 KHNYNO15037 678 aaKnown RBP17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 FBLP22087 321 aaKnown RBP17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 PRPS1P60891 318 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 EBPQ15125 230 aaKnown RBP17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 CDONQ4KMG0 1287 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 SLITRK4Q8IW52 837 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ZNF511Q8NB15 262 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 LSM14AQ8ND56 463 aaKnown RBP17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ACOT12Q8WYK0 555 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ORAI1Q96D31 301 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 SMIM19Q96E16 107 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 CLEC4AQ9UMR7 237 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 TCRBV16S1A1N1A0A5B0 115 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 LANCL1O43813 399 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 MAP2K3P46734 347 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 RPS11P62280 158 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ACTA2P62736 377 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ACTG2P63267 376 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 SIRPAP78324 504 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 LGALS3BPQ08380 585 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 NR0B2Q15466 257 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 TRAM1Q15629 374 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ELAVL1Q15717 326 aaKnown RBP17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ALG10Q5BKT4 473 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 LINC01590Q5TEZ4 76 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ARHGAP40Q5TG30 622 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 LANCL3Q6ZV70 420 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 FAM122BQ7Z309 247 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 GPR135Q8IZ08 494 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 EID2Q8N6I1 236 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 LRRC75AQ8NAA5 344 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 OR14A2Q96R54 314 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 GPX7Q96SL4 187 aaPredicted RBP17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 LPAR4Q99677 370 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 MESP1Q9BRJ9 268 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ZNF304Q9HCX3 659 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ZNF221Q9UK13 617 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 ADAM30Q9UKF2 790 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 HIF3AQ9Y2N7 669 aa17.01■□□□□ 0.31
PDLIM4-201ENST00000253754 OGG1O15527 345 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 HCRTR2O43614 444 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 SP9P0CG40 484 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 TFPIP10646 304 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 PSKH1P11801 424 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 EDNRAP25101 427 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 RPS5P46782 204 aaKnown RBP17■□□□□ 0.31
PDLIM4-201ENST00000253754 GBX2P52951 348 aaPredicted RBP17■□□□□ 0.31
PDLIM4-201ENST00000253754 CTXN1P60606 82 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 SYS1Q8N2H4 156 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 D2HGDHQ8N465 521 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 CEP76Q8TAP6 659 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 TRMT10AQ8TBZ6 339 aaKnown RBP17■□□□□ 0.31
PDLIM4-201ENST00000253754 DMRTB1Q96MA1 342 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 DPYSL5Q9BPU6 564 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 ALG12Q9BV10 488 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 RNF121Q9H920 327 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 EXOSC3Q9NQT5 275 aaKnown RBP17■□□□□ 0.31
PDLIM4-201ENST00000253754 CYSLTR2Q9NS75 346 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 CTSFQ9UBX1 484 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 MKL2Q9ULH7 1088 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 ATXN7L1Q9ULK2 861 aaPredicted RBP17■□□□□ 0.31
PDLIM4-201ENST00000253754 ASCC3Q8N3C0 2202 aaKnown RBP17■□□□□ 0.31
PDLIM4-201ENST00000253754 MPDZO75970 2070 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 LY6G6EA0A0G2JKS1 128 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 TRBV2A0A0J9YWF9 115 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 DCTN6O00399 190 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 ASAH2BP0C7U1 165 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 IL12BP29460 328 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 AVPR2P30518 371 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 HOXD12P35452 270 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 MAGEB1P43366 347 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 BIKQ13323 160 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 C1QL3Q5VWW1 255 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 WDR74Q6RFH5 385 aaPredicted RBP17■□□□□ 0.31
PDLIM4-201ENST00000253754 TRILQ7L0X0 811 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 JAZF1Q86VZ6 243 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 TAAR8Q969N4 342 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 MVB12AQ96EY5 273 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 ST6GAL2Q96JF0 529 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 WACQ9BTA9 647 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 VN1R1Q9GZP7 353 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 SMOC1Q9H4F8 434 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 NEK6Q9HC98 313 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 PCDHGB7Q9Y5F8 929 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 U3KQA8 63 aa17■□□□□ 0.31
PDLIM4-201ENST00000253754 LYRM1O43325 122 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 CPNE3O75131 537 aaKnown RBP16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 RPL18Q07020 188 aaKnown RBP16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 RIN1Q13671 783 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 TBRG1Q3YBR2 411 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 MS4A15Q8N5U1 240 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 ZBTB44Q8NCP5 570 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 OR4D9Q8NGE8 314 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 OR5H6Q8NGV6 325 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 FRMD6Q96NE9 622 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms