RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SRFP11831 508 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 MAGEB1P43366 347 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 CTXN1P60606 82 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 RRAS2P62070 204 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 EFR3AQ14156 821 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 ALG10Q5BKT4 473 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 RNASE12Q5GAN4 147 aaKnown RBP17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 ZNF684Q5T5D7 378 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 LSM14AQ8ND56 463 aaKnown RBP17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 HAVCR2Q8TDQ0 301 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 ADIPOR1Q96A54 375 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 SLC46A1Q96NT5 459 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 CCNL2Q96S94 520 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 NOX4Q9NPH5 578 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 EXOSC3Q9NQT5 275 aaKnown RBP17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 TP53BP1Q12888 1972 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 ABCA7Q8IZY2 2146 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 TMEM150CB9EJG8 249 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 DCTN6O00399 190 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 GMFGO60234 142 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 CPNE3O75131 537 aaKnown RBP17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 OR2B3O76000 313 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 DDAH2O95865 285 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 IGKV3-11P04433 115 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 CD3GP09693 182 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 HSD17B12Q53GQ0 312 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 OVCH1Q7RTY7 1134 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 JAZF1Q86VZ6 243 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 ZNF721Q8TF20 911 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 YIPF5Q969M3 257 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 LPAR4Q99677 370 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 GFI1Q99684 422 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 MFRPQ9BY79 579 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 NRSN2Q9GZP1 204 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 CHRNA10Q9GZZ6 450 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 CA14Q9ULX7 337 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 KLHDC2Q9Y2U9 406 aa17.79■□□□□ 0.44
CDC42EP1-201ENST00000249014 IGKV3D-11A0A0A0MRZ8 115 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 CDC14CA4D256 554 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 ACOD1A6NK06 481 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 ICOSLGO75144 302 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 UQCRC1P31930 480 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 RORAP35398 523 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 DGCR2P98153 550 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 HSF2Q03933 536 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 BIKQ13323 160 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 TIGD3Q6B0B8 471 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 RGP1Q92546 391 aaPredicted RBP17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 ZDHHC12Q96GR4 267 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 LCORQ96JN0 433 aaPredicted RBP17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 DERL3Q96Q80 235 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 RXFP3Q9NSD7 469 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 ANKRD10Q9NXR5 420 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 EPHA6Q9UF33 1036 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 MRPS7Q9Y2R9 242 aaKnown RBP17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 MMACHCQ9Y4U1 282 aa17.78■□□□□ 0.44
CDC42EP1-201ENST00000249014 FRG2CA6NGY1 282 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 LMO7DNF2Z398 122 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 ZFPL1O95159 310 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 UBL3O95164 117 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 SRMP19623 302 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 TACR3P29371 465 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 SDHAP31040 664 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 RPL18Q07020 188 aaKnown RBP17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 NTRK2Q16620 822 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 C14orf28Q4W4Y0 310 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 OGFOD3Q6PK18 319 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 ZFP3Q96NJ6 502 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 GAL3ST4Q96RP7 486 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 SPATA2Q9UM82 520 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 RNF215Q9Y6U7 377 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 SPAG17Q6Q759 2223 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 RP1P56715 2156 aa17.77■□□□□ 0.44
CDC42EP1-201ENST00000249014 PCNX3Q9H6A9 2034 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 TMEM72A0PK05 275 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 H7C1C5 153 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 GPRIN2O60269 458 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 EVI2BP34910 448 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 MMP15P51511 669 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLC25A1P53007 311 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 LCN6P62502 163 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 ZNF563Q8TA94 476 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 LGALS14Q8TCE9 139 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 NUDT9Q9BW91 350 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 RAB33BQ9H082 229 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLC25A18Q9H1K4 315 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 ASXL3Q9C0F0 2248 aa17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 COL5A1P20908 1838 aaPredicted RBP17.77■□□□□ 0.43
CDC42EP1-201ENST00000249014 RHPN2P1A8MT19 583 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 MBTPS2O43462 519 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 ADRB1P08588 477 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 APEHP13798 732 aaKnown RBP17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 IGFBP4P22692 258 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 OR1D5P58170 312 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 BTG1P62324 171 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 ZNF117Q03924 483 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 FAPQ12884 760 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 CCDC92Q53HC0 331 aaPredicted RBP17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 YIF1BQ5BJH7 314 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms