RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 DUSP18Q8NEJ0 188 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TRIM63Q969Q1 353 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 OTULINQ96BN8 352 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 NEDD4LQ96PU5 975 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ATF6BQ99941 703 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM27Q9HBJ8 222 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 ADAP2Q9NPF8 381 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TRIM36Q9NQ86 728 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 TRPV5Q9NQA5 729 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 MAT2BQ9NZL9 334 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 POU2F3Q9UKI9 436 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 SIGLEC7Q9Y286 467 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 NTNG1Q9Y2I2 539 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 CSNK1G3Q9Y6M4 447 aa7.19□□□□□ -1.26
CXCR4-201ENST00000241393 COL4A2P08572 1712 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 GOLGA4Q13439 2230 aaKnown RBP7.18□□□□□ -1.26
CXCR4-201ENST00000241393 MARCH11A6NNE9 402 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 C12orf71A8MTZ7 269 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 B4DXG7 233 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 SOCS6O14544 535 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 RNF13O43567 381 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 CHP2O43745 196 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 FGF17O60258 216 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 SLC35E2P0CK97 266 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 POLR2CP19387 275 aaPredicted RBP7.18□□□□□ -1.26
CXCR4-201ENST00000241393 NT5EP21589 574 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 S100A1P23297 94 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 CD79BP40259 229 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 RABIFP47224 123 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TGM4P49221 684 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 FXYD6P3P58550 94 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 ACTC1P68032 377 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 ACTA1P68133 377 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 HYAL1Q12794 435 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 QPRTQ15274 297 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 MAPK14Q16539 360 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF791Q3KP31 576 aaPredicted RBP7.18□□□□□ -1.26
CXCR4-201ENST00000241393 ATAD3CQ5T2N8 411 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 HACD4Q5VWC8 232 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TRIQKQ629K1 86 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM53Q6P2H8 277 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 PLBD1Q6P4A8 553 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 CNIH2Q6PI25 160 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 SMARCD3Q6STE5 483 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 SHFQ7M4L6 423 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TPRA1Q86W33 373 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 SIRT6Q8N6T7 355 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 CSNK1A1LQ8N752 337 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TEX19Q8NA77 164 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 C19orf18Q8NEA5 215 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 BBS1Q8NFJ9 593 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 IL17DQ8TAD2 202 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 FAM3CQ92520 227 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TSACCQ96A04 125 aaPredicted RBP7.18□□□□□ -1.26
CXCR4-201ENST00000241393 BPIFA2Q96DR5 249 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 LRRC46Q96FV0 321 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 ST6GAL2Q96JF0 529 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 LMF2Q9BU23 707 aaKnown RBP7.18□□□□□ -1.26
CXCR4-201ENST00000241393 CRB3Q9BUF7 120 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 RPP25Q9BUL9 199 aaKnown RBP7.18□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF426Q9BUY5 554 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TRAF4Q9BUZ4 470 aaPredicted RBP7.18□□□□□ -1.26
CXCR4-201ENST00000241393 ALG8Q9BVK2 526 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TMED9Q9BVK6 235 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 GSDMCQ9BYG8 508 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 TRIM2Q9C040 744 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 RNF121Q9H920 327 aa7.18□□□□□ -1.26
CXCR4-201ENST00000241393 RBFOX1Q9NWB1 397 aaKnown RBP7.18□□□□□ -1.26
CXCR4-201ENST00000241393 LOC105369274A0A096LPK9 316 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 A0A0B4J2E0 115 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 LOC102723532A0A0G2JNH3 316 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 CENPVL1A0A0U1RR11 272 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 A0A1B0GX12 115 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 DAPL1A0PJW8 107 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TTC36A6NLP5 189 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 RIIAD1A6NNX1 92 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PRR23D1E9PI22 279 aaPredicted RBP7.17□□□□□ -1.26
CXCR4-201ENST00000241393 SCAMP1O15126 338 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PLA2G10O15496 165 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PLPP2O43688 288 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 IDH3BO43837 385 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PTP4A3O75365 173 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PIAS2O75928 621 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 SLC2A10O95528 541 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 NTN1O95631 604 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 EGFP01133 1207 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TNFP01375 233 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 IFNGP01579 166 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 GSTT2P0CG29 244 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 GSTT2BP0CG30 244 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PRR23D2P0DMB1 279 aaPredicted RBP7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PRKAR1AP10644 381 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 SLC2A2P11168 524 aaPredicted RBP7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PRG2P13727 222 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF3P17036 446 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 MAKP20794 623 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 MYL9P24844 172 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 SLC6A6P31641 620 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PSMD4P55036 377 aaKnown RBP7.17□□□□□ -1.26
CXCR4-201ENST00000241393 SKP1P63208 163 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms