RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SSTR2P30874 369 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 SMIM11AP58511 58 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 TLE4Q04727 773 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 PIN1Q13526 163 aaPredicted RBP10.02□□□□□ -0.81
SF3B6-201ENST00000233468 C1DQ13901 141 aaKnown RBP10.02□□□□□ -0.81
SF3B6-201ENST00000233468 TRIM25Q14258 630 aaKnown RBP10.02□□□□□ -0.81
SF3B6-201ENST00000233468 P2RY6Q15077 328 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 POU4F3Q15319 338 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 RRM2BQ7LG56 351 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 SSX8Q7RTT4 187 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 VTCN1Q7Z7D3 282 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 GPAT4Q86UL3 456 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 DHFR2Q86XF0 187 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 CCDC103Q8IW40 242 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 CDK20Q8IZL9 346 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 LINC00528Q8N1L1 170 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 TMEM99Q8N816 258 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF610Q8N9Z0 462 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 ACBD4Q8NC06 268 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 FAM156AQ8NDB6 213 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 ADPRHL1Q8NDY3 354 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 TAAR8Q969N4 342 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 APH1AQ96BI3 265 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 DNAJA3Q96EY1 480 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 LRGUKQ96M69 825 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 BTBD10Q9BSF8 475 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 PTDSS2Q9BVG9 487 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 ANKRD19PQ9H560 264 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 C12orf49Q9H741 205 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 KRCC1Q9NPI7 259 aaPredicted RBP10.02□□□□□ -0.81
SF3B6-201ENST00000233468 GALNT8Q9NY28 637 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 TAS2R1Q9NYW7 299 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 ACTR3BQ9P1U1 418 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 KCNN3Q9UGI6 736 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 MED31Q9Y3C7 131 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 ENPP4Q9Y6X5 453 aa10.02□□□□□ -0.81
SF3B6-201ENST00000233468 HRNRQ86YZ3 2850 aaPredicted RBP10.02□□□□□ -0.81
SF3B6-201ENST00000233468 NCKAP5O14513 1909 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 IGKV1D-42A0A075B6H8 117 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 LOC102725191A0A1B0GVB3 256 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF716A6NP11 495 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 FTCDNL1E5RQL4 147 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 CASKO14936 926 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 FZD7O75084 574 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 GOSR1O95249 250 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 MT-ND1P03886 318 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 IGFBP2P18065 325 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 RHCEP18577 417 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 GRPRP30550 384 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 OR3A2P47893 321 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 IL1RL1Q01638 556 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 PMS2P3Q13401 168 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 SLC17A1Q14916 467 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 TRAM2Q15035 370 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 EXOC3L2Q2M3D2 409 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 TFAP2EQ6VUC0 442 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 ABHD12BQ7Z5M8 362 aaPredicted RBP10.01□□□□□ -0.81
SF3B6-201ENST00000233468 CDH24Q86UP0 819 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 RNF113BQ8IZP6 322 aaKnown RBP10.01□□□□□ -0.81
SF3B6-201ENST00000233468 OFCC1Q8IZS5 231 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 OR9K2Q8NGE7 335 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 FAM222BQ8WU58 562 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 TMEM239Q8WW34 195 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 TMEM45BQ96B21 275 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 ASB9Q96DX5 294 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 C14orf79Q96F83 325 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 OXGR1Q96P68 337 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 THTPAQ9BU02 230 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF426Q9BUY5 554 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 AMBRA1Q9C0C7 1298 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 OR10A4Q9H209 315 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 FKRPQ9H9S5 495 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 MCCC2Q9HCC0 563 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 NANSQ9NR45 359 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 MRPL39Q9NYK5 338 aaKnown RBP10.01□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF229Q9UJW7 825 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 GPR52Q9Y2T5 361 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 FREM3P0C091 2139 aa10.01□□□□□ -0.81
SF3B6-201ENST00000233468 PRRC2AP48634 2157 aaKnown RBP10.01□□□□□ -0.81
SF3B6-201ENST00000233468 M0R082 166 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 DNAJC8O75937 253 aaPredicted RBP10□□□□□ -0.81
SF3B6-201ENST00000233468 FABP3P05413 133 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 UMPSP11172 480 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 UGT2B10P36537 528 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 TRAP1Q12931 704 aaKnown RBP10□□□□□ -0.81
SF3B6-201ENST00000233468 BNIP1Q12981 228 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 TAF11Q15544 211 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF474Q6S9Z5 364 aaPredicted RBP10□□□□□ -0.81
SF3B6-201ENST00000233468 CASP12Q6UXS9 341 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 Q6ZT83 130 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 AAED1Q7RTV5 226 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 NUFIP2Q7Z417 695 aaKnown RBP10□□□□□ -0.81
SF3B6-201ENST00000233468 UEVLDQ8IX04 471 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 UBE2J2Q8N2K1 259 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 STEAP2Q8NFT2 490 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 OR5J2Q8NH18 312 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF417Q8TAU3 575 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 DACH2Q96NX9 599 aa10□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF300Q96RE9 604 aaPredicted RBP10□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF347Q96SE7 839 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms