RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MT-ND5P03915 603 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 ARG1P05089 322 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 ACVR1BP36896 505 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 LILRA4P59901 499 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 INSM1Q01101 510 aaPredicted RBP11.97□□□□□ -0.49
MSH2-201ENST00000233146 MEF2DQ14814 521 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 LRRC37A5PQ49AS3 106 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 TMEM69Q5SWH9 247 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 ZNF683Q8IZ20 524 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 BPIFB2Q8N4F0 458 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 INO80EQ8NBZ0 244 aaPredicted RBP11.97□□□□□ -0.49
MSH2-201ENST00000233146 OR10AD1Q8NGE0 317 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 C1orf216Q8TAB5 229 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 PPP1R1CQ8WVI7 109 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 MAFIPQ8WZ33 124 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 MED17Q9NVC6 651 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 PLXNA3P51805 1871 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 MGAT4DA6NG13 374 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 CYTIPO60759 359 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 ATP1B3P54709 279 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 ZNF235Q14590 738 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 DMKNQ6E0U4 476 aaPredicted RBP11.97□□□□□ -0.49
MSH2-201ENST00000233146 LPCAT3Q6P1A2 487 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 OR6T1Q8NGN1 323 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 SLC38A5Q8WUX1 472 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 SMPDL3BQ92485 455 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 S100A16Q96FQ6 103 aaKnown RBP11.97□□□□□ -0.49
MSH2-201ENST00000233146 CCNL2Q96S94 520 aaPredicted RBP11.97□□□□□ -0.49
MSH2-201ENST00000233146 TBX5Q99593 518 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 FNDC11Q9BVV2 318 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 SNHG12Q9BXW3 62 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 OR52A5Q9H2C5 316 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 SEMA4GQ9NTN9 838 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 ANKRD10Q9NXR5 420 aa11.97□□□□□ -0.49
MSH2-201ENST00000233146 MYBPHLA2RUH7 354 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 OR5H15A6NDH6 313 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 OR5H1A6NKK0 313 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 SLC25A14O95258 325 aaPredicted RBP11.96□□□□□ -0.49
MSH2-201ENST00000233146 SOD3P08294 240 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 NT5EP21589 574 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 AOAHP28039 575 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 TWF1Q12792 350 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 LY6KQ17RY6 165 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 OR2A2Q6IF42 318 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 FCRLAQ7L513 359 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 ZNF227Q86WZ6 799 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 NLGN1Q8N2Q7 840 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 GHSRQ92847 366 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 CXorf40BQ96DE9 158 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 OR5B2Q96R09 309 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 MICU1Q9BPX6 476 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 DDA1Q9BW61 102 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 GOLGA2P5Q9HBQ8 144 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
MSH2-201ENST00000233146 FLVCR1Q9Y5Y0 555 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 CENPFP49454 3210 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 TMEM238LA0A1B0GVL6 79 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 ZNF724A8MTY0 619 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 SOX15O60248 233 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 HBP1O60381 514 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 TYMPP19971 482 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 SULT1A1P50225 295 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 OAZ1P54368 228 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 DVL1P1P54792 670 aaPredicted RBP11.96□□□□□ -0.49
MSH2-201ENST00000233146 TAS2R43P59537 309 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 DOC2AQ14183 400 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 TOMM34Q15785 309 aaPredicted RBP11.96□□□□□ -0.49
MSH2-201ENST00000233146 PNLIPRP3Q17RR3 467 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 TPGS2Q68CL5 300 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 ADCK2Q7Z695 626 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 ZBTB2Q8N680 514 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 GAL3ST3Q96A11 431 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 SMAD5Q99717 465 aaKnown RBP11.96□□□□□ -0.49
MSH2-201ENST00000233146 NDC1Q9BTX1 674 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 CYTL1Q9NRR1 136 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 ARL15Q9NXU5 204 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 H2AFY2Q9P0M6 372 aaPredicted RBP11.96□□□□□ -0.49
MSH2-201ENST00000233146 KCNE5Q9UJ90 142 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 POMT1Q9Y6A1 747 aa11.96□□□□□ -0.49
MSH2-201ENST00000233146 GREB1Q4ZG55 1949 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 ELOA3CA0A087WX78 387 aaPredicted RBP11.96□□□□□ -0.5
MSH2-201ENST00000233146 DAPL1A0PJW8 107 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 GPR37L1O60883 481 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 OR4E1P0C645 316 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 TMEM11P17152 192 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 CR2P20023 1033 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 RPIAP49247 311 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 SERINC3Q13530 473 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 MS4A13Q5J8X5 152 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 HIST2H3PS2Q5TEC6 136 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 SERPINA13PQ6UXR4 307 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 LANCL3Q6ZV70 420 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 TAS1R1Q7RTX1 841 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 SELENOIQ9C0D9 397 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 FBXO44Q9H4M3 255 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 UBQLN4Q9NRR5 601 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 AKT3Q9Y243 479 aa11.96□□□□□ -0.5
MSH2-201ENST00000233146 HELZP42694 1942 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms