RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PINK1Q9BXM7 581 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 TRBV2A0A0J9YWF9 115 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 C4orf51C9J302 202 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 PCCBP05166 539 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 RFC3P40938 356 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 PDX1P52945 283 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 TAS2R38P59533 333 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 S100A12P80511 92 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 ELFN2Q5R3F8 820 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 TMEM71Q6P5X7 295 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 UNQ6126/PRO20091Q6UXV3 157 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 SLC36A1Q7Z2H8 476 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 OR6K3Q8NGY3 331 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 SEC22AQ96IW7 307 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 TLNRD1Q9H1K6 362 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 TSPAN10Q9H1Z9 355 aaPredicted RBP12.93□□□□□ -0.34
SF1-201ENST00000227503 USP36Q9P275 1121 aaKnown RBP12.93□□□□□ -0.34
SF1-201ENST00000227503 FOXJ3Q9UPW0 622 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 KCNK7Q9Y2U2 307 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.93□□□□□ -0.34
SF1-201ENST00000227503 ZNF337Q9Y3M9 751 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 RAB19A4D1S5 217 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 KLF4O43474 513 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 TMEM64Q6YI46 380 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 TMED4Q7Z7H5 227 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 FBXO4Q9UKT5 387 aa12.93□□□□□ -0.34
SF1-201ENST00000227503 NPIPA5A0A0B4J1W7 369 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 UNC119BA6NIH7 251 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 TTLL8A6PVC2 850 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 NPIPA7E9PJI5 369 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 BHLHE40O14503 412 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 CTDSPLO15194 276 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 SSX5O60225 188 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 ECDO95905 644 aaPredicted RBP12.92□□□□□ -0.34
SF1-201ENST00000227503 GP1BAP07359 652 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 H2AFB1P0C5Y9 115 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 NPIPA8P0DM63 369 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 EDNRAP25101 427 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 MC3RP41968 323 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 SOX2P48431 317 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 BLOC1S1P78537 153 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 FOXK2Q01167 660 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 MLF2Q15773 248 aaPredicted RBP12.92□□□□□ -0.34
SF1-201ENST00000227503 PRRT3Q5FWE3 981 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 MBOAT2Q6ZWT7 520 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 OR1M1Q8NGA1 313 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 OR51S1Q8NGJ8 323 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 GLYATL2Q8WU03 294 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 OR7D2Q96RA2 312 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 SLC25A32Q9H2D1 315 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 OR5V1Q9UGF6 321 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 SYT5O00445 386 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 EIF4E2O60573 245 aaKnown RBP12.92□□□□□ -0.34
SF1-201ENST00000227503 SRMP19623 302 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 DPP4P27487 766 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 CSF2RBP32927 897 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 AKR1C3P42330 323 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 PPP2CBP62714 309 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 PPP2CAP67775 309 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 PRDX1Q06830 199 aaKnown RBP12.92□□□□□ -0.34
SF1-201ENST00000227503 TGM3Q08188 693 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 STX4Q12846 297 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 ZIC1Q15915 447 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 OR2A1Q8NGT9 310 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 CNRIP1Q96F85 164 aaPredicted RBP12.92□□□□□ -0.34
SF1-201ENST00000227503 MICU1Q9BPX6 476 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 ZDHHC4Q9NPG8 344 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 MED17Q9NVC6 651 aa12.92□□□□□ -0.34
SF1-201ENST00000227503 SIDT1Q9NXL6 827 aaKnown RBP12.92□□□□□ -0.34
SF1-201ENST00000227503 MRPS23Q9Y3D9 190 aaKnown RBP12.92□□□□□ -0.34
SF1-201ENST00000227503 A0A1W2PR48 441 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 TMEM218A2RU14 115 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 IGLON5A6NGN9 336 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 IFITM5A6NNB3 132 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 ICOSLGO75144 302 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 AQP8O94778 261 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 ACTL6AO96019 429 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 HNRNPA1P09651 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
SF1-201ENST00000227503 SLC35G4P0C7Q5 338 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 BMP7P18075 431 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 NTSP30990 170 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 AP3S2P59780 193 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 GMFBP60983 142 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 ODF4Q2M2E3 257 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 LIN54Q6MZP7 749 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 ETV3LQ6ZN32 361 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 ASPGQ86U10 573 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 LRRTM1Q86UE6 522 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 SDR9C7Q8NEX9 313 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 OR52L1Q8NGH7 329 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 SFXN5Q8TD22 340 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 INSM2Q96T92 566 aaPredicted RBP12.91□□□□□ -0.34
SF1-201ENST00000227503 PTDSS2Q9BVG9 487 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 HDAC8Q9BY41 377 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 XKR8Q9H6D3 395 aa12.91□□□□□ -0.34
SF1-201ENST00000227503 DEC1Q9P2X7 70 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms