RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CDX2Q99626 313 aaPredicted RBP7.52□□□□□ -1.21
VAMP3-201ENST00000054666 TGIF2Q9GZN2 237 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 ADAM19Q9H013 955 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 SACM1LQ9NTJ5 587 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 RARRES3Q9UL19 164 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 ATXN7L1Q9ULK2 861 aaPredicted RBP7.52□□□□□ -1.21
VAMP3-201ENST00000054666 CCDC163A0A0D9SF12 145 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 OR6C70A6NIJ9 312 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF879B4DU55 563 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 XKRYO14609 159 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TFECO14948 347 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 FLRT2O43155 660 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TRIM3O75382 744 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SC5DO75845 299 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TXNDC12O95881 172 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 MT-ATP6P00846 226 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 KRT8P05787 483 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 CD1AP06126 327 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TACSTD2P09758 323 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 GRPRP30550 384 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 MAP2K3P46734 347 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 RFX2P48378 723 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 QPRTQ15274 297 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SLC6A19Q695T7 634 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 GUSBP11Q6P575 273 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 COX15Q7KZN9 410 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SLC16A9Q7RTY1 509 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SAMD12Q8N8I0 201 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF441Q8N8Z8 693 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 LRRC75AQ8NAA5 344 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 IL17RDQ8NFM7 739 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 OR13C5Q8NGS8 318 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 CHAC2Q8WUX2 184 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 OR6C1Q96RD1 312 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 DDOQ99489 341 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 C11orf54Q9H0W9 315 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 COPS3Q9UNS2 423 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 RASD1Q9Y272 281 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 FER1L5A0AVI2 2057 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 CACNA1EQ15878 2313 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TRAV1-2A0A0B4J238 106 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 A0A1B0GTQ1 180 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SOX1O00570 391 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 YKT6O15498 198 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SEC14L5O43304 696 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SUSD5O60279 629 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SCRG1O75711 98 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 CCNKO75909 580 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 AHSA1O95433 338 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 HLA-DQB1P01920 261 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 CDKN2AP42771 156 aaKnown RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 OR10A3P58181 314 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SLC26A5P58743 744 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 RNF4P78317 190 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 MRPL28Q13084 256 aaKnown RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 P2RY14Q15391 338 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 NKAIN1Q4KMZ8 207 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 HSD17B12Q53GQ0 312 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 FAM69AQ5T7M9 428 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 LINC01590Q5TEZ4 76 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 RSBN1Q5VWQ0 802 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 PMS2CLQ68D20 193 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF57Q68EA5 555 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TSSK4Q6SA08 328 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 C5orf46Q6UWT4 87 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 IL20RBQ6UXL0 311 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 GRINAQ7Z429 371 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 OR4D9Q8NGE8 314 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TRMT10AQ8TBZ6 339 aaKnown RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TMEM234Q8WY98 164 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 PHYHIPQ92561 330 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 NAT6Q93015 286 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TAAR8Q969N4 342 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TP53INP1Q96A56 240 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 RNF31Q96EP0 1072 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 NEDD4LQ96PU5 975 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TSPAN32Q96QS1 320 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 UBL7Q96S82 380 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 MNTQ99583 582 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SMAD5Q99717 465 aaKnown RBP7.51□□□□□ -1.21
VAMP3-201ENST00000054666 SOSTQ9BQB4 213 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 PPP1R3EQ9H7J1 279 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 TAS2R10Q9NYW0 307 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 NPFFR2Q9Y5X5 522 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 USP34Q70CQ2 3546 aa7.51□□□□□ -1.21
VAMP3-201ENST00000054666 ARID1BQ8NFD5 2236 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 IGLV3-12A0A075B6K2 115 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 TMED7-TICAM2A0A0A6YYA0 188 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 IGHV3-20A0A0C4DH32 117 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 NOTOA8MTQ0 251 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 FAM171A2A8MVW0 826 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 IDSB3KWA1 339 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 MAGEB4O15481 346 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ALOX12BO75342 701 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 TRIOO75962 3097 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 OR6A2O95222 327 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 BGLAPP02818 100 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 PRKCAP17252 672 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 ELK1P19419 428 aa7.5□□□□□ -1.21
VAMP3-201ENST00000054666 HTR3AP46098 478 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms