RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 FAM69BQ5VUD6 431 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 C22orf42Q6IC83 251 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 LEG1Q6P5S2 330 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 VASH1Q7L8A9 365 aaPredicted RBP12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 NAXDQ8IW45 347 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 DND1Q8IYX4 353 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 TMEM203Q969S6 136 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 SLC25A46Q96AG3 418 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 ZMYND19Q96E35 227 aaPredicted RBP12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 LIN37Q96GY3 246 aaPredicted RBP12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 TAAR9Q96RI9 348 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 TM9SF2Q99805 663 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 NUAK2Q9H093 628 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 GALNT9Q9HCQ5 603 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 MRPL39Q9NYK5 338 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 GRHPRQ9UBQ7 328 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 ZMIZ1Q9ULJ6 1067 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 YARS2Q9Y2Z4 477 aaKnown RBP12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 WIF1Q9Y5W5 379 aa12.96□□□□□ -0.34
RTFDC1-201ENST00000023939 CUL9Q8IWT3 2517 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 IQCMA0A1B0GVH7 501 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 FTCDNL1E5RQL4 147 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 PLPP2O43688 288 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 STK17BO94768 372 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 DLGAP3O95886 979 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 IGHMP01871 453 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 MRPL3P09001 348 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 PPP5CP53041 499 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 ACTA2P62736 377 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 ACTG2P63267 376 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF45Q02386 682 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 KRR1Q13601 381 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 NDUFAF7Q7L592 441 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 SLC35F2Q8IXU6 374 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 ZFP41Q8N8Y5 198 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 OR11G2Q8NGC1 345 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 OR10G3Q8NGC4 313 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 ZPLD1Q8TCW7 415 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 MRPL48Q96GC5 212 aaKnown RBP12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 MRGPRX4Q96LA9 322 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 FRMD6Q96NE9 622 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 TSPAN32Q96QS1 320 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 TBX5Q99593 518 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 BARHL1Q9BZE3 327 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 C6orf62Q9GZU0 229 aaPredicted RBP12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 TOR4AQ9NXH8 423 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 KLRF1Q9NZS2 232 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 PPP4R1LQ9P1A2 415 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 PADI1Q9ULC6 663 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 R4GN57 208 aa12.95□□□□□ -0.34
RTFDC1-201ENST00000023939 TEX51A0A1B0GUA7 166 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 TP53I11O14683 189 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 RNF13O43567 381 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 F13BP05160 661 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 CD1AP06126 327 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 NUBP1P53384 320 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 INSM1Q01101 510 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 CDONQ4KMG0 1287 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 MESTQ5EB52 335 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 POMZP3Q6PJE2 187 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 OPN5Q6U736 354 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 C6orf15Q6UXA7 325 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 Q6ZNX1 250 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 RAB11FIP2Q7L804 512 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 SCAIQ8N9R8 606 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 MFSD8Q8NHS3 518 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNRF4Q8WWF5 429 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 NTNG2Q96CW9 530 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 CDC6Q99741 560 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 ALG12Q9BV10 488 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 POTEKPQ9BYX7 375 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 METTL7AQ9H8H3 244 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 INIPQ9NRY2 104 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 MED11Q9P086 117 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 SIRT4Q9Y6E7 314 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 LAMA1P25391 3075 aa12.94□□□□□ -0.34
RTFDC1-201ENST00000023939 PNMA8CA0A1B0GUJ8 204 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 PLPP3O14495 311 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 SULT1C4O75897 302 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 CDRT1O95170 752 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 GRPRP30550 384 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 CASP3P42574 277 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 DBPQ10586 325 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 ZP4Q12836 540 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 DMKNQ6E0U4 476 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 BTLAQ7Z6A9 289 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 CCDC190Q86UF4 302 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 FADS6Q8N9I5 356 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 OR2T4Q8NH00 348 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 C4orf36Q96KX1 117 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 SNTG1Q9NSN8 517 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 GALNT8Q9NY28 637 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF346Q9UL40 294 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 CHCHD2Q9Y6H1 151 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 NCOR1O75376 2440 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 SLC35F4A4IF30 521 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 NPIPB13A6NJU9 1138 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 NPIPB4C9JG80 1138 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms