RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TGDSO95455 350 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 LGI1O95970 557 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 NUDT7P0C024 238 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 FAM157CP0CG43 387 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 PNMTP11086 282 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
ERCC1-201ENST00000013807 PRKAR1BP31321 381 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 MAGOHP61326 146 aaKnown RBP13.82□□□□□ -0.2
ERCC1-201ENST00000013807 EFNB3Q15768 340 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 RPS26P11Q5JNZ5 115 aaPredicted RBP13.82□□□□□ -0.2
ERCC1-201ENST00000013807 NET1Q7Z628 596 aaPredicted RBP13.82□□□□□ -0.2
ERCC1-201ENST00000013807 HTRA1Q92743 480 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 OXGR1Q96P68 337 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 TMBIM4Q9HC24 238 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 SLC52A3Q9NQ40 469 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 CA10Q9NS85 328 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 NKIRAS1Q9NYS0 192 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 B3GAT1Q9P2W7 334 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 FBXO9Q9UK97 447 aaPredicted RBP13.82□□□□□ -0.2
ERCC1-201ENST00000013807 B9A039 149 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 UPK3AO75631 287 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 KRT33AO76009 404 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 CRYAAP02489 173 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 USF1P22415 310 aaPredicted RBP13.81□□□□□ -0.2
ERCC1-201ENST00000013807 SERPINF1P36955 418 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 NAAAQ02083 359 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 LGALS3BPQ08380 585 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 C6orf10Q5SRN2 563 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 FAM69AQ5T7M9 428 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 CYB5R2Q6BCY4 276 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 NIPAL3Q6P499 406 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 BLOC1S3Q6QNY0 202 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 FUNDC1Q8IVP5 155 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 OR6S1Q8NH40 331 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 KTI12Q96EK9 354 aaPredicted RBP13.81□□□□□ -0.2
ERCC1-201ENST00000013807 C7orf26Q96N11 449 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 ALKBH3Q96Q83 286 aaPredicted RBP13.81□□□□□ -0.2
ERCC1-201ENST00000013807 CACYBPQ9HB71 228 aaKnown RBP13.81□□□□□ -0.2
ERCC1-201ENST00000013807 MYOZ1Q9NP98 299 aaPredicted RBP13.81□□□□□ -0.2
ERCC1-201ENST00000013807 SLC25A37Q9NYZ2 338 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 USH1CQ9Y6N9 552 aa13.81□□□□□ -0.2
ERCC1-201ENST00000013807 IGHV4-31P0DP07 118 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 ARAFP10398 606 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 CBR1P16152 277 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 ZNF43P17038 809 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 CDH2P19022 906 aaPredicted RBP13.8□□□□□ -0.2
ERCC1-201ENST00000013807 RPS5P46782 204 aaKnown RBP13.8□□□□□ -0.2
ERCC1-201ENST00000013807 UBE2NP61088 152 aaKnown RBP13.8□□□□□ -0.2
ERCC1-201ENST00000013807 LSM11P83369 360 aaKnown RBP eCLIP13.8□□□□□ -0.2
ERCC1-201ENST00000013807 FAM91A1Q658Y4 838 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 DHRS4L2Q6PKH6 230 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 MSRB3Q8IXL7 192 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 CCDC36Q8IYA8 594 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 ADPRHL1Q8NDY3 354 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 NUP37Q8NFH4 326 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 OR4F15Q8NGB8 312 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 DNAJA4Q8WW22 397 aaPredicted RBP13.8□□□□□ -0.2
ERCC1-201ENST00000013807 MAL2Q969L2 176 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 FBXO17Q96EF6 278 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 SLC41A3Q96GZ6 507 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 SORCS2Q96PQ0 1159 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 PLK3Q9H4B4 646 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 LPAR3Q9UBY5 353 aa13.8□□□□□ -0.2
ERCC1-201ENST00000013807 TRBV5-3A0A0A0MS03 114 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 LOC390937A0A1W2PQ73 354 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 NR5A2O00482 541 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 AIM2O14862 343 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 CECR9P0C854 216 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 GPX2P18283 190 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 PPIBP23284 216 aaKnown RBP13.79□□□□□ -0.2
ERCC1-201ENST00000013807 HTR2AP28223 471 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 NR4A2P43354 598 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 PPOXP50336 477 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 PDLIM4P50479 330 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 SNRPD2P62316 118 aaKnown RBP13.79□□□□□ -0.2
ERCC1-201ENST00000013807 ROR2Q01974 943 aaKnown RBP13.79□□□□□ -0.2
ERCC1-201ENST00000013807 ADIPOQQ15848 244 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 BEND6Q5SZJ8 279 aaPredicted RBP13.79□□□□□ -0.2
ERCC1-201ENST00000013807 REEP3Q6NUK4 255 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 ULK3Q6PHR2 472 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 SLC2A7Q6PXP3 512 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 NHLRC1Q6VVB1 395 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 H1FNTQ75WM6 255 aaPredicted RBP13.79□□□□□ -0.2
ERCC1-201ENST00000013807 KDM8Q8N371 416 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 GOLGA6L1Q8N7Z2 621 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 SLC38A4Q969I6 547 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 TAAR8Q969N4 342 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 ZBTB9Q96C00 473 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 KCNK17Q96T54 332 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 TMEM38AQ9H6F2 299 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 ZNF442Q9H7R0 627 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 EVA1AQ9H8M9 152 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 FKBP7Q9Y680 259 aa13.79□□□□□ -0.2
ERCC1-201ENST00000013807 IGKV1D-42A0A075B6H8 117 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 A0A1B0GWA3 101 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 SLC43A1O75387 559 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 LY6HO94772 140 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 GZMKP49863 264 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 CLDN17P56750 224 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms