RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 RNF141Q8WVD5 230 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 TM4SF18Q96CE8 201 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 EID2BQ96D98 161 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 OR7D2Q96RA2 312 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC19A3Q9BZV2 496 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 OR52D1Q9H346 318 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 PLEKHA1Q9HB21 404 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 GAR1Q9NY12 217 aaKnown RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 TRABD2BA6NFA1 517 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 RRASP10301 218 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 UBE2KP61086 200 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 TRA2BP62995 288 aaKnown RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 GAS6Q14393 721 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 IHHQ14623 411 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF385BQ569K4 471 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 FAM83HQ6ZRV2 1179 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC29A4Q7RTT9 530 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 CDRT4Q8N9R6 151 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 DNAAF1Q8NEP3 725 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 STEAP2Q8NFT2 490 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 CDS1Q92903 461 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF566Q969W8 418 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ARRDC3Q96B67 414 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ZMYND19Q96E35 227 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 TMEM41AQ96HV5 264 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 PTCHD1Q96NR3 888 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 PRR14Q9BWN1 585 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 PLPP1O14494 284 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 PPP1R3DO95685 299 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF888P0CJ79 500 aaPredicted RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 S100GP29377 79 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 EEF1A1P68104 462 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 EEF1A2Q05639 463 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 TSPAN31Q12999 210 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ACTBL2Q562R1 376 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 EEF1A1P5Q5VTE0 462 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ZC3H14Q6PJT7 736 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 THAP4Q8WY91 577 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 FOXRED1Q96CU9 486 aaPredicted RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 INSM2Q96T92 566 aaPredicted RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 NEU3Q9UQ49 428 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 C14orf166Q9Y224 244 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 TIMM8BQ9Y5J9 83 aaPredicted RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 TSPAN11A1L157 253 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 C11orf98E9PRG8 122 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 K7ESM1 405 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 GYPBP06028 91 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 NTSR1P30989 418 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 CD80P33681 288 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 XCR1P46094 333 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 OR5W2Q8NH69 310 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 TANKQ92844 425 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 HLA-CQ95604 372 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 SLAMF9Q96A28 289 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ZBTB8AQ96BR9 441 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC25A18Q9H1K4 315 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 GLIPR2Q9H4G4 154 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 GAREM1Q9H706 876 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 BABAM2Q9NXR7 383 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 AIPO00170 330 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 HCRTR2O43614 444 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 RNH1P13489 461 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 RBMS1P29558 406 aaKnown RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC19A1P41440 591 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 GPR143P51810 404 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ACTBP60709 375 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ACTG1P63261 375 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 CTBSQ01459 385 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC22A25Q6T423 547 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF704Q6ZNC4 412 aaPredicted RBP11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 MMP21Q8N119 569 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC25A46Q96AG3 418 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 PDXPQ96GD0 296 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 MEGF10Q96KG7 1140 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 G6PC3Q9BUM1 346 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 C20orf85Q9H1P6 137 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 PLCXD1Q9NUJ7 323 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 ADAM18Q9Y3Q7 739 aa11.24□□□□□ -0.61
TSPAN9-201ENST00000011898 LDB3O75112 727 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 PRKRAO75569 313 aaKnown RBP11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 KCNJ3P48549 501 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 IL13RA1P78552 427 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 MRPS10P82664 201 aaKnown RBP11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 CYCSP99999 105 aaKnown RBP11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 B4GALNT1Q00973 533 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 BAMBIQ13145 260 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 TP53I3Q53FA7 332 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 SOHLH1Q5JUK2 328 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 HACD4Q5VWC8 232 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 FGF13Q92913 245 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 BPIFA2Q96DR5 249 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 LMF1Q96S06 567 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 CNN2Q99439 309 aaKnown RBP11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 ZFYVE21Q9BQ24 234 aa11.23□□□□□ -0.61
TSPAN9-201ENST00000011898 GABARAPL1Q9H0R8 117 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms