RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Mrpl23O35972 146 aaKnown RBP9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Sp3O70494 783 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ifitm5O88728 134 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 TyrP11344 533 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Dnase1P49183 284 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Lingo2Q3URE9 606 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Sdr39u1Q5M8N4 308 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Slc10a5Q5PT54 434 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ephx4Q6IE26 359 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Adam26bQ6IMH6 699 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Cyb561a3Q6P1H1 242 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Cd300lfQ6SJQ7 337 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Stk40Q7TNL3 435 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Pgrmc2Q80UU9 217 aaKnown RBP9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Rgs8Q8BXT1 180 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Clec14aQ8VCP9 459 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr273Q8VG87 317 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ndufs1Q91VD9 727 aaKnown RBP9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr713Q920G5 324 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Abcg5Q99PE8 652 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Asf1aQ9CQE6 204 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Lpcat2bQ9D5U0 516 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Pebp4Q9D9G2 242 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Rnf32Q9JIT1 368 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Dnajb8Q9QYI7 227 aa9.04□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gm3604A0A087WPN2 559 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr785A0A0N4SVC3 312 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr1253A2AUA2 318 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ttc23lA6H6E9 458 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Nipsnap3aB1AWZ3 247 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr432E9Q8M2 312 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gp1baO35930 734 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ccr6O54689 367 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Sypl2O89104 264 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Sept4P28661 478 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 TesP47226 423 aaKnown RBP9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Cdk5P49615 292 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Dvl1P51141 695 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Anxa11P97384 503 aaKnown RBP9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Smad4P97471 551 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Atp5iQ06185 71 aaKnown RBP9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Itpripl2Q3UV16 535 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Arg1Q61176 323 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 TCAIMQ66JZ4 499 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Srd5a1Q68FF9 255 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ffar4Q7TMA4 361 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr1251Q7TQZ3 318 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Kiaa0895lQ810A5 467 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ifna16Q810G1 189 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Znf436Q8BPP0 452 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ldlrad4Q8BWJ4 306 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Sall4Q8BX22 1067 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Tsen54Q8C2A2 525 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Apbb3Q8R1C9 486 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Pycr1Q922W5 309 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Stard4Q99JV5 224 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Ufsp2Q99K23 461 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Mrpl9Q99N94 265 aaKnown RBP9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 GpnmbQ99P91 574 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Dmrtc1c1Q9D410 238 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Brix1Q9DCA5 353 aaKnown RBP9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gde1Q9JL56 331 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Pias4Q9JM05 507 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 PrepQ9QUR6 710 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Slc22a28B2RT89 552 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Vmn1r157E9Q069 297 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Vmn1r139E9Q8L6 297 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Vmn1r112G3UY48 297 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gm3633L7N233 213 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gm9611L7N476 213 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 RhoP15409 348 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 P20040 264 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Acp2P24638 423 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Aqp2P56402 271 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Prdx5P99029 210 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 D630036H23RikQ3UQD6 204 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Tapt1Q4VBD2 564 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr381Q5SSP0 311 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Vat1Q62465 406 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr1105Q7TR58 312 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Pyhin1Q8BV49 420 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Mtmr14Q8VEL2 648 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr1002Q8VFK2 318 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr229Q8VFN5 307 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr1466Q8VFW4 310 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Olfr578Q8VH17 313 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Slc27a4Q91VE0 643 aaKnown RBP9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 WwoxQ91WL8 414 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gjd3Q91YD1 278 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Slc22a30Q96LX3 552 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Atg12Q9CQY1 141 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Tex19.2Q9D5S1 317 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Atg101Q9D8Z6 218 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Izumo1Q9D9J7 397 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Cmtm2aQ9DAR1 169 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Nrip3Q9JJR9 240 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Bco1Q9JJS6 566 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Gpr37Q9QY42 600 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Uchl1Q9R0P9 223 aa9.03□□□□□ -0.96
Hmgb1-201ENSMUST00000085546 Atrnl1Q6A051 1378 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms