RNA–Protein interactions for RNA: ENST00000641575.1

SCN1A-219, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 BASIC

Gene SCN1A, Length 12,874 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-219ENST00000641575 NAP1L6A6NFF2 107 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 H0YAE9 185 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 DNPH1O43598 174 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 FAM87AP0C7U9 286 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 RD3LP0DJH9 198 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 POU2F1P14859 743 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 RPS19P39019 145 aaKnown RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 FASLGP48023 281 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 LSSP48449 732 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 GIPRP48546 466 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 PXNP49023 591 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 CYB561P49447 251 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 GABREP78334 506 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 SIM1P81133 766 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 FOXO1Q12778 655 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 POM121L1PQ3SYA9 428 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 FAM174BQ3ZCQ3 159 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 KHDC1Q4VXA5 237 aaKnown RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 ABI3BPQ7Z7G0 1075 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 MDGA1Q8NFP4 955 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 OR2M7Q8NG81 312 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 OR1M1Q8NGA1 313 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 OR5D14Q8NGL3 314 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 FOXRED1Q96CU9 486 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 CPPED1Q9BRF8 314 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 ZNF395Q9H8N7 513 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 IGSF5Q9NSI5 407 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 LGALS13Q9UHV8 139 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 RNF215Q9Y6U7 377 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 NUP98P52948 1817 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 MS4A18H0YCH9 400 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 hCG_2039718K7EN88 272 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 SPINT2O43291 252 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 PPP3CBP16298 524 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 S100A4P26447 101 aaKnown RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 CORO1AP31146 461 aaKnown RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 EIF1P41567 113 aaKnown RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 KIR2DL1P43626 348 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 KIR2DL2P43627 348 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 CACNG1Q06432 222 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 ADIGQ0VDE8 80 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 PIN1Q13526 163 aaPredicted RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 MICAQ29983 383 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 MS4A18Q3C1V0 323 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 FFAR4Q5NUL3 377 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 CD276Q5ZPR3 534 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 PNCKQ6P2M8 343 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 Q6ZN92 141 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 OR4S1Q8NGB4 309 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 OR52H1Q8NGJ2 320 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 OR5D18Q8NGL1 313 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 OR5H2Q8NGV7 314 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 OR1L1Q8NH94 360 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 PKIBQ9C010 78 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 C11orf68Q9H3H3 251 aaKnown RBP2.61□□□□□ -1.99
SCN1A-219ENST00000641575 SEMA6BQ9H3T3 888 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 PLLPQ9Y342 182 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 WASHC3Q9Y3C0 194 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 HRH3Q9Y5N1 445 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 PIK3C2AO00443 1686 aa2.61□□□□□ -1.99
SCN1A-219ENST00000641575 A0A087WZY1 265 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 C3orf80F5H4A9 247 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 GABRDO14764 452 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 MRPS14O60783 128 aaKnown RBP2.6□□□□□ -1.99
SCN1A-219ENST00000641575 HTR3BO95264 441 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 ANKRD34CP0C6C1 535 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 SELLP14151 372 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 CD38P28907 300 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 IMPA1P29218 277 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 PBX2P40425 430 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 CASP7P55210 303 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 IQCJQ1A5X6 159 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 YIF1BQ5BJH7 314 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 LRRC10Q5BKY1 277 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 OTUD1Q5VV17 481 aaPredicted RBP2.6□□□□□ -1.99
SCN1A-219ENST00000641575 CST9LP1Q5W188 147 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 PTCRAQ6ISU1 281 aaPredicted RBP2.6□□□□□ -1.99
SCN1A-219ENST00000641575 SPNS3Q6ZMD2 512 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 ETV3LQ6ZN32 361 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 DBX2Q6ZNG2 339 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 RBPMS2Q6ZRY4 209 aaKnown RBP2.6□□□□□ -1.99
SCN1A-219ENST00000641575 KLBQ86Z14 1044 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 ENTHD1Q8IYW4 607 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 ZNF561Q8N587 486 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 NTAN1Q96AB6 310 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 EXOSC8Q96B26 276 aaKnown RBP2.6□□□□□ -1.99
SCN1A-219ENST00000641575 FAM84BQ96KN1 310 aaPredicted RBP2.6□□□□□ -1.99
SCN1A-219ENST00000641575 PINK1Q9BXM7 581 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 CWH43Q9H720 699 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 SIDT1Q9NXL6 827 aaKnown RBP2.6□□□□□ -1.99
SCN1A-219ENST00000641575 ASB4Q9Y574 426 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 AQP12BA6NM10 295 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 J3QLW9 94 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 TGFB1P01137 390 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 SOD2P04179 222 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 DLDP09622 509 aaKnown RBP2.6□□□□□ -1.99
SCN1A-219ENST00000641575 DHRS4L1P0CG22 281 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 ZNF19P17023 458 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 CTRB1P17538 263 aa2.6□□□□□ -1.99
SCN1A-219ENST00000641575 KIR3DL2P43630 455 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms