RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 POC1BQ8TC44 478 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 THAP4Q8WY91 577 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 LRR1Q96L50 414 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 PTDSS2Q9BVG9 487 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 CCDC90BQ9GZT6 254 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 FKRPQ9H9S5 495 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 FKBP14Q9NWM8 211 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 CHRNA9Q9UGM1 479 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 ZNF229Q9UJW7 825 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 GPR52Q9Y2T5 361 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 A0A087WZY1 265 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 EFCAB10A6NFE3 127 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 CLCA1A8K7I4 914 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF208O43345 1280 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 MRPS14O60783 128 aaKnown RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 TRIM3O75382 744 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 AHSA1O95433 338 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 SLC2A10O95528 541 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 F10P00742 488 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 MT-ND2P03891 347 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 HIST1H2ABP04908 130 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 ASAH2BP0C7U1 165 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 PRKAR1AP10644 381 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 WT1P19544 449 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 TCEA1P23193 301 aaKnown RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 CD96P40200 585 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 AQP2P41181 271 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 DNASE1L1P49184 302 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 RRADP55042 308 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 PRPS1P60891 318 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 RPS4XP62701 263 aaKnown RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 TUBA3CQ13748 450 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 ANKDD1AQ495B1 522 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 GXYLT1Q4G148 440 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 SYT14P1Q58G82 188 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 SLC35F1Q5T1Q4 408 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 TIGD3Q6B0B8 471 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 TUBA3EQ6PEY2 450 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 HIST3H2AQ7L7L0 130 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 NANOGNBQ7Z5D8 188 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 SATL1Q86VE3 508 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 IGFN1Q86VF2 1251 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF227Q86WZ6 799 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 GALNT16Q8N428 558 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 PSD4Q8NDX1 1056 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 MOSPD2Q8NHP6 518 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 C9orf43Q8TAL5 461 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 HIST1H2ACQ93077 130 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 MYDGFQ969H8 173 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 DNAJA3Q96EY1 480 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 JSRP1Q96MG2 331 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 ZNF582Q96NG8 517 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 UTP23Q9BRU9 249 aaKnown RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 COPS4Q9BT78 406 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 OR11A1Q9GZK7 315 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 TIMMDC1Q9NPL8 285 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 SERINC1Q9NRX5 453 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 GPR83Q9NYM4 423 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 HIF3AQ9Y2N7 669 aa11.83□□□□□ -0.52
PHGDH-221ENST00000641573 RPL36Q9Y3U8 105 aaKnown RBP11.83□□□□□ -0.52
PHGDH-221ENST00000641573 CENPEQ02224 2701 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 A0A0G2JMM0 328 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 A0A1W2PPB8 328 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 A0A1W2PRS3 328 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 KIR3DP1A8MWS1 328 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 KDM4EB2RXH2 506 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 MCIDASD6RGH6 385 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 BLOC1S5-TXNDC5H3BN57 136 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 EFNA2O43921 213 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 AGFG2O95081 481 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 MT-ATP6P00846 226 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 CDK1P06493 297 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 JUNBP17275 347 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 HK1P19367 917 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 IL11P20809 199 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 DPP4P27487 766 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 RPL4P36578 427 aaKnown RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 EIF1P41567 113 aaKnown RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 MAP2K6P52564 334 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 GTF2A1P52655 376 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 DSCR4P56555 118 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 SOX8P57073 446 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 NEDD8Q15843 81 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 FAM69AQ5T7M9 428 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 ARHGAP11AQ6P4F7 1023 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 DPY19L2P2Q6ZN68 376 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 LINC00696Q6ZRV3 163 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 PRSS48Q7RTY5 328 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 MAMDC2Q7Z304 686 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-221ENST00000641573 LRRC75AQ8NAA5 344 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 ATP6V1C2Q8NEY4 427 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 OR5M1Q8NGP8 315 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 OR6S1Q8NH40 331 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 ZBTB8AQ96BR9 441 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 SLC25A36Q96CQ1 311 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 DDIT4LQ96D03 193 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 GNRHR2Q96P88 292 aa11.82□□□□□ -0.52
PHGDH-221ENST00000641573 ERMAPQ96PL5 475 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms