RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 SBK2P0C263 348 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 AOAHP28039 575 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TACR3P29371 465 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ADRA1AP35348 466 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GALEQ14376 348 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GLT8D1Q68CQ7 371 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PODNL1Q6PEZ8 512 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF627Q7L945 461 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 NOXA1Q86UR1 476 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 FAM217AQ8IXS0 508 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 FAM185AQ8N0U4 392 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 FAM109AQ8N4B1 249 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SLC15A4Q8N697 577 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 BANPQ8N9N5 519 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 OR10X1Q8NGY0 326 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SLC45A3Q96JT2 553 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 OR14A2Q96R54 314 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 VN1R3Q9BXE9 311 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CD248Q9HCU0 757 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 C11orf16Q9NQ32 467 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 RYDENQ9NUL5 291 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ONECUT1Q9UBC0 465 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 OR6C70A6NIJ9 312 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 A8MVM7 634 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 NKX2-8O15522 239 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GDF9O60383 454 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PIAS1O75925 651 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 IGHV3-9P01782 118 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PF4P02776 101 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 FABP1P07148 127 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GRPP07492 148 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SFTPBP07988 381 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF14P17017 642 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 IGFBP5P24593 272 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 LILRA2Q8N149 483 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 OR13C3Q8NGS6 347 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CCL4L1Q8NHW4 92 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 NUDT8Q8WV74 236 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TBX5Q99593 518 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CCDC106Q9BWC9 280 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF286AQ9HBT8 521 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CLEC4EQ9ULY5 219 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 BHMG1C9JSJ3 638 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 CASC3O15234 703 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GKN3PP0CG01 181 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TSFMP43897 325 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PIGFQ07326 219 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SEMA3BQ13214 749 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ACSM3Q53FZ2 586 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PGAP1Q75T13 922 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 IGFN1Q86VF2 1251 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 GID4Q8IVV7 300 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SPACA3Q8IXA5 215 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MAML2Q8IZL2 1156 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 DEFB108BQ8NET1 73 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ANKRA2Q9H9E1 313 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 DHDHQ9UQ10 334 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 KIAA2026Q5HYC2 2103 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 RP2O75695 350 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 DBHP09172 617 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 APOBEC1P41238 236 aaKnown RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ALDH3B2P48448 385 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 DSCR4P56555 118 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 MICAQ29983 383 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 BEX5Q5H9J7 111 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 RTL6Q6ICC9 239 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF773Q6PK81 442 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TRILQ7L0X0 811 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 PRR18Q8N4B5 295 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 OR52N2Q8NGI0 321 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 OR4K15Q8NH41 348 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SPIN2AQ99865 258 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SPIN2BQ9BPZ2 258 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 TREX2Q9BQ50 279 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-218ENST00000640036 KCNIP2Q9NS61 270 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 COPZ2Q9P299 210 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 SLC17A4Q9Y2C5 497 aa4.64□□□□□ -1.67
SCN1A-218ENST00000640036 ABCA3Q99758 1704 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF831Q5JPB2 1677 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 IGHV5-10-1A0A0J9YXX1 117 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MEIOCA2RUB1 952 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 DISC1C4P0D8 188 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 NDUFB3O43676 98 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SEC14L2O76054 403 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 COX4I1P13073 169 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PKLRP30613 574 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 BMXP51813 675 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MTPNP58546 118 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 OLIG2Q13516 323 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 OGFRL1Q5TC84 451 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 FCRLAQ7L513 359 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CNTD1Q8N815 330 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 OR2T33Q8NG76 320 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF473Q8WTR7 871 aaKnown RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SSC4DQ8WTU2 575 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 TSPEARQ8WU66 669 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ASB11Q8WXH4 323 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SPACA9Q96E40 222 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 DIRC2Q96SL1 478 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PLK3Q9H4B4 646 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms