RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ELOA3Q8NG57 546 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 GPR32P1Q8NGA4 272 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 STK35Q8TDR2 534 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 MUS81Q96NY9 551 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 ALKBH3Q96Q83 286 aaPredicted RBP15.56■□□□□ 0.08
PNKP-230ENST00000638016 RABEP2Q9H5N1 569 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 RPS6KB2Q9UBS0 482 aa15.56■□□□□ 0.08
PNKP-230ENST00000638016 FN1P02751 2386 aaKnown RBP15.55■□□□□ 0.08
PNKP-230ENST00000638016 M0R1B8 84 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 NDUFS7O75251 213 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 MFN2O95140 757 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 FOSL1P15407 271 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 PCBP3P57721 371 aaKnown RBP15.55■□□□□ 0.08
PNKP-230ENST00000638016 RGS8P57771 180 aaPredicted RBP15.55■□□□□ 0.08
PNKP-230ENST00000638016 CYP51A1Q16850 503 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 ALG10BQ5I7T1 473 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 CREB3L2Q70SY1 520 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 KRT73Q86Y46 540 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 ARMC8Q8IUR7 673 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
PNKP-230ENST00000638016 MFSD8Q8NHS3 518 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 RNF217Q8TC41 542 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 SMAP2Q8WU79 429 aaPredicted RBP15.55■□□□□ 0.08
PNKP-230ENST00000638016 TAAR8Q969N4 342 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 SLC35B4Q969S0 331 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 USB1Q9BQ65 265 aaKnown RBP15.55■□□□□ 0.08
PNKP-230ENST00000638016 SF3B5Q9BWJ5 86 aaKnown RBP15.55■□□□□ 0.08
PNKP-230ENST00000638016 AMBRA1Q9C0C7 1298 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 SLCO5A1Q9H2Y9 848 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 PIF1Q9H611 641 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 ZNF701Q9NV72 531 aaPredicted RBP15.55■□□□□ 0.08
PNKP-230ENST00000638016 B3GAT1Q9P2W7 334 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 TRIM33Q9UPN9 1127 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 CORO2BQ9UQ03 480 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 ANGPT4Q9Y264 503 aa15.55■□□□□ 0.08
PNKP-230ENST00000638016 LRRN3E7EW58 273 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 M0R082 166 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 UPK3AO75631 287 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 CD8AP01732 235 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 HOXB4P17483 251 aaPredicted RBP15.54■□□□□ 0.08
PNKP-230ENST00000638016 CDH11P55287 796 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 ATP5J2P56134 94 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 RPS4XP62701 263 aaKnown RBP15.54■□□□□ 0.08
PNKP-230ENST00000638016 IRX1P78414 480 aaPredicted RBP15.54■□□□□ 0.08
PNKP-230ENST00000638016 OR1Q1Q15612 314 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 DUSP7Q16829 419 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 HIKESHIQ53FT3 197 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 NIPAL3Q6P499 406 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 P2RY8Q86VZ1 359 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 LSMEM1Q8N8F7 131 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 OR4D11Q8NGI4 311 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 ZNF417Q8TAU3 575 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 COX4I2Q96KJ9 171 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 ZNF587Q96SQ5 575 aaPredicted RBP15.54■□□□□ 0.08
PNKP-230ENST00000638016 SPATA5L1Q9BVQ7 753 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 CXorf56Q9H5V9 222 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 SLC17A5Q9NRA2 495 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 PARPBPQ9NWS1 579 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 CISD1Q9NZ45 108 aaKnown RBP15.54■□□□□ 0.08
PNKP-230ENST00000638016 USP22Q9UPT9 525 aa15.54■□□□□ 0.08
PNKP-230ENST00000638016 ZANQ9Y493 2812 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 E7EQL1 145 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 M0QX08 132 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 OVOL3O00110 214 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 LGI1O95970 557 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 CD40P25942 277 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 MPGP29372 298 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 GRPRP30550 384 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 LTBQ06643 244 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 NPTX1Q15818 432 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 RABL3Q5HYI8 236 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 PRSS57Q6UWY2 283 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 TSPYL5Q86VY4 417 aaPredicted RBP15.53■□□□□ 0.08
PNKP-230ENST00000638016 RBM45Q8IUH3 476 aaKnown RBP15.53■□□□□ 0.08
PNKP-230ENST00000638016 WDFY1Q8IWB7 410 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 C11orf65Q8NCR3 313 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 OR10A6Q8NH74 314 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 POM121Q96HA1 1249 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 ZNF607Q96SK3 696 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 KAT8Q9H7Z6 458 aaKnown RBP15.53■□□□□ 0.08
PNKP-230ENST00000638016 KLHL14Q9P2G3 628 aa15.53■□□□□ 0.08
PNKP-230ENST00000638016 TESQ9UGI8 421 aaKnown RBP15.53■□□□□ 0.08
PNKP-230ENST00000638016 A0A0B4J2E0 115 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 A0A1B0GX12 115 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 FXYD1O00168 92 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 HPRP00739 348 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 PAX1P15863 534 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 GZMMP51124 257 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 CRYBA2P53672 197 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 CDH12P55289 794 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 CLDN17P56750 224 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 NCALDP61601 193 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 TUBA1BP68363 451 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 TUBA4AP68366 448 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 GUCY1A3Q02108 690 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 SLC22A25Q6T423 547 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 CLEC9AQ6UXN8 241 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 TUBA1AQ71U36 451 aa15.52■□□□□ 0.08
PNKP-230ENST00000638016 NET1Q7Z628 596 aaPredicted RBP15.52■□□□□ 0.08
PNKP-230ENST00000638016 BIVMQ86UB2 503 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms