RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 NDRG3Q9UGV2 375 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 PRSS50Q9UI38 385 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 BAG5Q9UL15 447 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 FAF1Q9UNN5 650 aaPredicted RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 GPC6Q9Y625 555 aaPredicted RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 V9GYQ6 96 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 CUBNO60494 3623 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 SONP18583 2426 aaKnown RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 ZC3H12DA2A288 527 aaKnown RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 DPRXA6NFQ7 191 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 A6NHS1 94 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 ZNF716A6NP11 495 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 G3V2T6 193 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 H0YAE9 185 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 EI24O14681 340 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 EIF4E2O60573 245 aaKnown RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 STX11O75558 287 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 ZNF682O95780 498 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 MT-ND1P03886 318 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 UBL4AP11441 157 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 EIF1P41567 113 aaKnown RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 CRATP43155 626 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 MAGEA2P43356 314 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 ALDH3A2P51648 485 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 RAC3P60763 192 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 KRTAP1-1Q07627 177 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 EPS8Q12929 822 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 DAG1Q14118 895 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 TAB1Q15750 504 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 SPDYE7PQ495Y7 208 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 LRRC23Q53EV4 343 aaPredicted RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 KRT80Q6KB66 452 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 CBLL1Q75N03 491 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 FCRLAQ7L513 359 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 COMTD1Q86VU5 262 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 CARM1Q86X55 608 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 RNF130Q86XS8 419 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 HIPK1Q86Z02 1210 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 ZDHHC21Q8IVQ6 265 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 FAM86B1Q8N7N1 296 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 ZNF614Q8N883 585 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 OR5K1Q8NHB7 308 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 PNPT1Q8TCS8 783 aaKnown RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 XAGE5Q8WWM1 108 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 LZICQ8WZA0 190 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 TFAP2CQ92754 450 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 S100PBPQ96BU1 408 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 MOAP1Q96BY2 351 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 CNBD2Q96M20 576 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 PIP5K1AQ99755 562 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 OR11A1Q9GZK7 315 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 ACTR6Q9GZN1 396 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 ZNF696Q9H7X3 374 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 IL1RAPQ9NPH3 570 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 CTPS2Q9NRF8 586 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 ACER3Q9NUN7 267 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 BEX4Q9NWD9 120 aaPredicted RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 THUMPD1Q9NXG2 353 aaKnown RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 SMPD3Q9NY59 655 aaPredicted RBP6.94□□□□□ -1.3
PNKP-229ENST00000637897 NPAP1Q9NZP6 1156 aa6.94□□□□□ -1.3
PNKP-229ENST00000637897 JMJD1CQ15652 2540 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 TRIM64A6NGJ6 449 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 TRIM64BA6NI03 449 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 PDLIM1O00151 329 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 GTPBP1O00178 669 aaKnown RBP6.93□□□□□ -1.3
PNKP-229ENST00000637897 CYTIPO60759 359 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 E2F6O75461 281 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 ADAP00813 363 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 ALPLP05186 524 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 FABP3P05413 133 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 YES1P07947 543 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 SOD3P08294 240 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 NUDT7P0C024 238 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 DANCRP0C864 163 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 ARAFP10398 606 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 IMPDH2P12268 514 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 FCGR2AP12318 317 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 HPGDP15428 266 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 PAX1P15863 534 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 IGHV1-2P23083 117 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 MYF6P23409 242 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 CAPGP40121 348 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 ACAA2P42765 397 aaKnown RBP6.93□□□□□ -1.3
PNKP-229ENST00000637897 OR3A2P47893 321 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 KCNJ5P48544 419 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 ANXA11P50995 505 aaKnown RBP6.93□□□□□ -1.3
PNKP-229ENST00000637897 P2RY4P51582 365 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 ARHGDIAP52565 204 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 DSTNP60981 165 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 NKX6-1P78426 367 aaPredicted RBP6.93□□□□□ -1.3
PNKP-229ENST00000637897 H3F3AP84243 136 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 MERTKQ12866 999 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 SELENBP1Q13228 472 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 RFX4Q33E94 735 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 SLC36A3Q495N2 470 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 SFRP5Q5T4F7 317 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 ABLIM2Q6H8Q1 611 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 BHLHB9Q6PI77 547 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 TMPPEQ6ZT21 453 aa6.93□□□□□ -1.3
PNKP-229ENST00000637897 CCDC80Q76M96 950 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms