RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RCBTB2O95199 551 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 IL2RAP01589 272 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 IFI30P13284 250 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 CBLP22681 906 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 PRKCDQ05655 676 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 EXOC3L2Q2M3D2 409 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 OTUD3Q5T2D3 398 aaPredicted RBP14.28□□□□□ -0.12
CLN6-216ENST00000636876 OR2A2Q6IF42 318 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 ZFP1Q6P2D0 407 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 MAMDC2Q7Z304 686 aaPredicted RBP14.28□□□□□ -0.12
CLN6-216ENST00000636876 CCDC103Q8IW40 242 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 C10orf67Q8IYJ2 551 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 OR4K5Q8NGD3 323 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 ZNF417Q8TAU3 575 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 PIGXQ8TBF5 258 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 ABHD3Q8WU67 409 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 PYDC1Q8WXC3 89 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 RND1Q92730 232 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 BPIFA2Q96DR5 249 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 CCDC120Q96HB5 630 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 ZFP3Q96NJ6 502 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 ZNF587Q96SQ5 575 aaPredicted RBP14.28□□□□□ -0.12
CLN6-216ENST00000636876 ASPNQ9BXN1 380 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 CHST11Q9NPF2 352 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 C6orf203Q9P0P8 240 aaPredicted RBP14.28□□□□□ -0.12
CLN6-216ENST00000636876 DNAJB9Q9UBS3 223 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 TMCC3Q9ULS5 477 aa14.28□□□□□ -0.12
CLN6-216ENST00000636876 SAMHD1Q9Y3Z3 626 aaKnown RBP14.28□□□□□ -0.12
CLN6-216ENST00000636876 SPTAN1Q13813 2472 aaKnown RBP14.27□□□□□ -0.12
CLN6-216ENST00000636876 GNGT2O14610 69 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 CLOCKO15516 846 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 RAMP1O60894 148 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 ENTPD5O75356 428 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 DEAF1O75398 565 aaPredicted RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 TMIGD3P0DMS9 266 aaPredicted RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 P2RY4P51582 365 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 PER3P56645 1201 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 ADORA2A-AS1P86434 159 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 RASGEF1BQ0VAM2 473 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 PPP1R8Q12972 351 aaKnown RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 GK3PQ14409 553 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 RNPS1Q15287 305 aaKnown RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 GTF2IRD2BQ6EKJ0 949 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 H1FNTQ75WM6 255 aaPredicted RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 GTF2IRD2Q86UP8 949 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 MCEMP1Q8IX19 187 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 GCNT2Q8N0V5 402 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 SCAIQ8N9R8 606 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 ADPRHL1Q8NDY3 354 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 LIPHQ8WWY8 451 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 INTS12Q96CB8 462 aaKnown RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 NANSQ9NR45 359 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 GLRX2Q9NS18 164 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 MRPL39Q9NYK5 338 aaKnown RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 SEC14L4Q9UDX3 406 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 ERRFI1Q9UJM3 462 aaPredicted RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 ZNF229Q9UJW7 825 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 TMEM5Q9Y2B1 443 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 B3GALT5Q9Y2C3 310 aa14.27□□□□□ -0.13
CLN6-216ENST00000636876 SPTBN1Q01082 2364 aaKnown RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 INTS1Q8N201 2190 aaKnown RBP14.27□□□□□ -0.13
CLN6-216ENST00000636876 NCOA6Q14686 2063 aaPredicted RBP14.26□□□□□ -0.13
CLN6-216ENST00000636876 A0A0G2JNJ9 132 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 HSPB2A8KAH6 182 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 LDLRP01130 860 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 HIST1H2ABP04908 130 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 CRHP06850 196 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 ASAH2BP0C7U1 165 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 FCGR1AP12314 374 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 FUT1P19526 365 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 MAKP20794 623 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 PMS2P3Q13401 168 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 PDK3Q15120 406 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 GUSBP1Q15486 140 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 ATP6AP1Q15904 470 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 HSPB2Q16082 182 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 HIST3H2AQ7L7L0 130 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 MEX3DQ86XN8 651 aaKnown RBP14.26□□□□□ -0.13
CLN6-216ENST00000636876 CDK20Q8IZL9 346 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 LINC00471Q8N535 108 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 LRRC17Q8N6Y2 441 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 NAXEQ8NCW5 288 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 OR5J2Q8NH18 312 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 HIST1H2ACQ93077 130 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 GMPPAQ96IJ6 420 aaPredicted RBP14.26□□□□□ -0.13
CLN6-216ENST00000636876 PSD2Q9BQI7 771 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 GP6Q9HCN6 339 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 KRCC1Q9NPI7 259 aaPredicted RBP14.26□□□□□ -0.13
CLN6-216ENST00000636876 KLHL9Q9P2J3 617 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 KLHL13Q9P2N7 655 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 Q9UFV3 132 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 ING1Q9UK53 422 aaPredicted RBP14.26□□□□□ -0.13
CLN6-216ENST00000636876 CLEC4AQ9UMR7 237 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 RASD1Q9Y272 281 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 U3KQV3 271 aa14.26□□□□□ -0.13
CLN6-216ENST00000636876 IGKV3D-15A0A087WSY6 115 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 A0A1W2PNV4 684 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 ZNF716A6NP11 495 aa14.25□□□□□ -0.13
CLN6-216ENST00000636876 H3BNX3 289 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms