RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 UMPSP11172 480 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 RBM34P42696 430 aaKnown RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 OR3A2P47893 321 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 SLC16A1P53985 500 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 TGFBR3Q03167 851 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 EGR4Q05215 589 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 FAM27E3Q08E93 113 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 FOXD4Q12950 439 aaPredicted RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 PIN1Q13526 163 aaPredicted RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 TRIM25Q14258 630 aaKnown RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 SLC17A1Q14916 467 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 TRAM2Q15035 370 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 GUSBP1Q15486 140 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 TAF11Q15544 211 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 MTX3Q5HYI7 312 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 ABLIM2Q6H8Q1 611 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 LINC00114Q6XXX2 140 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 RINLQ6ZS11 566 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 SSX8Q7RTT4 187 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 AAED1Q7RTV5 226 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 NUFIP2Q7Z417 695 aaKnown RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 DHFR2Q86XF0 187 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 RNF113BQ8IZP6 322 aaKnown RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 TMEM239Q8WW34 195 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 APH1AQ96BI3 265 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 PYURFQ96I23 114 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 HSH2DQ96JZ2 352 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 PRRC1Q96M27 445 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 LRGUKQ96M69 825 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 DACH2Q96NX9 599 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 WFDC6Q9BQY6 131 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 MED18Q9BUE0 208 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 RSPO3Q9BXY4 272 aaPredicted RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 OR10A4Q9H209 315 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 MCCC2Q9HCC0 563 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 NGBQ9NPG2 151 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 NPDC1Q9NQX5 325 aaPredicted RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 NANSQ9NR45 359 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 GALNT8Q9NY28 637 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 ZNF226Q9NYT6 803 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 TAS2R1Q9NYW7 299 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 ACTR3BQ9P1U1 418 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 MED31Q9Y3C7 131 aa7.31□□□□□ -1.24
PNKP-226ENST00000636840 ASH1LQ9NR48 2969 aaKnown RBP7.31□□□□□ -1.24
PNKP-226ENST00000636840 CACNA1DQ01668 2161 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 LOC102725191A0A1B0GVB3 256 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 CIB4A0PJX0 185 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 SH3D21A4FU49 640 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 ZNF726A6NNF4 738 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 ZNF716A6NP11 495 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 CH25HO95992 272 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 IGF2P01344 180 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 MT-ND1P03886 318 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 T-ENOLP0DO92 83 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 HOXB6P17509 224 aaKnown RBP7.3□□□□□ -1.24
PNKP-226ENST00000636840 IGFBP2P18065 325 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 RHCEP18577 417 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 TNFRSF1BP20333 461 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 PSMB1P20618 241 aaKnown RBP7.3□□□□□ -1.24
PNKP-226ENST00000636840 CBLP22681 906 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 AHCYP23526 432 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 IL32P24001 234 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 GRPRP30550 384 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 MSX2P35548 267 aaPredicted RBP7.3□□□□□ -1.24
PNKP-226ENST00000636840 CRYBA2P53672 197 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 ITGADQ13349 1161 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 POU4F3Q15319 338 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 FBXW9Q5XUX1 488 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 ZNF474Q6S9Z5 364 aaPredicted RBP7.3□□□□□ -1.24
PNKP-226ENST00000636840 CASP12Q6UXS9 341 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 Q6ZT83 130 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 CREB3L2Q70SY1 520 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 VTCN1Q7Z7D3 282 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 COMTD1Q86VU5 262 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 P3H2Q8IVL5 708 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 UEVLDQ8IX04 471 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 SCAIQ8N9R8 606 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 POMGNT2Q8NAT1 580 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 ADPRHL1Q8NDY3 354 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 OR9K2Q8NGE7 335 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 OR4D11Q8NGI4 311 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 OR5J2Q8NH18 312 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 MUCL1Q96DR8 90 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 C14orf79Q96F83 325 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 ZNF300Q96RE9 604 aaPredicted RBP7.3□□□□□ -1.24
PNKP-226ENST00000636840 ZNF347Q96SE7 839 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 BTBD10Q9BSF8 475 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 THTPAQ9BU02 230 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 TRIM15Q9C019 465 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 AMBRA1Q9C0C7 1298 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 NDEL1Q9GZM8 345 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 ANKRD19PQ9H560 264 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 FKRPQ9H9S5 495 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 KRCC1Q9NPI7 259 aaPredicted RBP7.3□□□□□ -1.24
PNKP-226ENST00000636840 ASB6Q9NWX5 421 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 GMPR2Q9P2T1 348 aaKnown RBP7.3□□□□□ -1.24
PNKP-226ENST00000636840 ZNF229Q9UJW7 825 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 NOX1Q9Y5S8 564 aa7.3□□□□□ -1.24
PNKP-226ENST00000636840 FLVCR1Q9Y5Y0 555 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms