RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FMO6PO60774 539 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 RGS11O94810 467 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 UBL3O95164 117 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 SIX6O95475 246 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 ATP1B1P05026 303 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 SMIM10L1P0DMW3 83 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 EN2P19622 333 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF10P21506 573 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 RAD52P43351 418 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 ZP1P60852 638 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 BDH1Q02338 343 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 NFATC4Q14934 902 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 SMUG1Q53HV7 270 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 TOR2AQ5JU69 321 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 MSANTD3Q96H12 275 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 SMIM10Q96HG1 83 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 C20orf85Q9H1P6 137 aa12.86□□□□□ -0.35
CACNA1A-228ENST00000636610 FANCMQ8IYD8 2048 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 B4DGG1 531 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 GALR3O60755 368 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 SLC22A5O76082 557 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 NDUFB2O95178 105 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 MPC2O95563 127 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 PROS1P07225 676 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 ILF3Q12906 894 aaKnown RBP eCLIP12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 KIR2DS3Q14952 304 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 CBLN3Q6UW01 205 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 SAMD14Q8IZD0 417 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 MS4A15Q8N5U1 240 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 NT5CQ8TCD5 201 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 GFI1Q99684 422 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF69Q9UC07 566 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 KLHDC2Q9Y2U9 406 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 SC5DO75845 299 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 SPI1P17947 270 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 RPS4Y1P22090 263 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 ARHGAP11AQ6P4F7 1023 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 TPRA1Q86W33 373 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 TOR1AIP2Q8NFQ8 470 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 OR51A4Q8NGJ6 313 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 SGTBQ96EQ0 304 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 MOGAT1Q96PD6 335 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 NTMQ9P121 344 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 NUBP2Q9Y5Y2 271 aa12.85□□□□□ -0.35
CACNA1A-228ENST00000636610 CELSR3Q9NYQ7 3312 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 OIP5O43482 229 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 ALDOBP05062 364 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 CDKN2AP42771 156 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 TAS2R43P59537 309 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 BTG1P62324 171 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 ENPP2Q13822 863 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 EXOSC2Q13868 293 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 CLPPQ16740 277 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF767PQ75MW2 155 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 SYNPRQ8TBG9 265 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF524Q96C55 264 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 MRGPRX1Q96LB2 322 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 NRSN2Q9GZP1 204 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 MKKSQ9NPJ1 570 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 CHRNA9Q9UGM1 479 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 FKBP7Q9Y680 259 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 MUC22E2RYF6 1773 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 KHNYNO15037 678 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 TRIM3O75382 744 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 ARL6IP5O75915 188 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 TSPAN5P62079 268 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF613Q6PF04 617 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 NHLRC1Q6VVB1 395 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 PPP1R14AQ96A00 147 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 CA10Q9NS85 328 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 ANKRD10Q9NXR5 420 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF224Q9NZL3 707 aa12.84□□□□□ -0.35
CACNA1A-228ENST00000636610 C11orf98E9PRG8 122 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 PTBP1P26599 531 aaKnown RBP eCLIP12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 DLX2Q07687 328 aaPredicted RBP12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 RTL10Q7L3V2 364 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 TMPRSS12Q86WS5 348 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 LIX1LQ8IVB5 337 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 ZNF321PQ8N8H1 164 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 NPEPL1Q8NDH3 523 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 OR11G2Q8NGC1 345 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 BAHD1Q8TBE0 780 aaPredicted RBP12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 PHOSPHO1Q8TCT1 267 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 RGP1Q92546 391 aaPredicted RBP12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 NRIP3Q9NQ35 241 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 DLL4Q9NR61 685 aa12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 YBX2Q9Y2T7 364 aaKnown RBP12.83□□□□□ -0.35
CACNA1A-228ENST00000636610 APBB3O95704 486 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 RAF1P04049 648 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 BLVRAP53004 296 aa12.83□□□□□ -0.36
CACNA1A-228ENST00000636610 FOXL2P58012 376 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms