RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZNF462Q96JM2 2506 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 A0A087WUJ7 227 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 TRGV5A0A0B4J1U4 118 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 TMEM72A0PK05 275 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 TTLL8A6PVC2 850 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 H3BML4 177 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 TNFRSF11BO00300 401 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 KPNA4O00629 521 aaPredicted RBP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 SUSD5O60279 629 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 WISP2O76076 250 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 DLX5P56178 289 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 EMX1Q04741 257 aaPredicted RBP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 RGS21Q2M5E4 152 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 PRR30Q53SZ7 412 aaPredicted RBP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 WDR88Q6ZMY6 472 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 P3H2Q8IVL5 708 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 SIAH3Q8IW03 269 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 TMEM255BQ8WV15 326 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 RORBQ92753 470 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 PRSS27Q9BQR3 290 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 C12orf10Q9HB07 376 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 MAN2C1Q9NTJ4 1040 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 PAK1IP1Q9NWT1 392 aaPredicted RBP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 VNN3Q9NY84 501 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 NCKAP5O14513 1909 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 TRBV4-1A0A0J9YWV2 114 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 A0A1W2PRQ8 180 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 B8ZZF3 427 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 EFNA2O43921 213 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 TFPIP10646 304 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 POU3F2P20265 443 aaPredicted RBP13.02□□□□□ -0.33
LINC00339-208ENST00000634934 STARP49675 285 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 IST1P53990 364 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 GFRA1P56159 465 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 SELENBP1Q13228 472 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 DGCR6Q14129 220 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 EXOC3L2Q2M3D2 409 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 UBE2UQ5VVX9 321 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 C3orf33Q6P1S2 294 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 C16orf87Q6PH81 154 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 ZNF730Q6ZMV8 503 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 TRILQ7L0X0 811 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 PRICKLE2Q7Z3G6 844 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 BPIFB6Q8NFQ5 453 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 NEIL3Q8TAT5 605 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 SNRNP40Q96DI7 357 aaKnown RBP13.02□□□□□ -0.33
LINC00339-208ENST00000634934 HRASLS5Q96KN8 279 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 DHRS1Q96LJ7 313 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 ALPK1Q96QP1 1244 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 MROQ9BYG7 248 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 TMCC3Q9ULS5 477 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 LYVE1Q9Y5Y7 322 aa13.02□□□□□ -0.33
LINC00339-208ENST00000634934 LINC01387J3KSC0 135 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 HCN1O60741 890 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 IGHG3P01860 377 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 CHMP24386 653 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 SFTPDP35247 375 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 UGT2B10P36537 528 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 DAPP51397 102 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 TUBA1BP68363 451 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 AQP6Q13520 282 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 MAD2L1BPQ15013 274 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-208ENST00000634934 OXA1LQ15070 435 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 DGUOKQ16854 277 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 TMEM176BQ3YBM2 270 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-208ENST00000634934 DCST1Q5T197 706 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 PODNL1Q6PEZ8 512 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 TUBA1AQ71U36 451 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 RRM2BQ7LG56 351 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 SLC7A13Q8TCU3 470 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 ABTB1Q969K4 478 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-208ENST00000634934 DNAJA3Q96EY1 480 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 HS6ST2Q96MM7 605 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 OR11A1Q9GZK7 315 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 ANKRD19PQ9H560 264 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 ASF1BQ9NVP2 202 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 TNFRSF10DQ9UBN6 386 aa13.01□□□□□ -0.33
LINC00339-208ENST00000634934 RELNP78509 3460 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 IGKV1D-42A0A075B6H8 117 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 A0A087WUU8 490 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 ZC3H12DA2A288 527 aaKnown RBP13□□□□□ -0.33
LINC00339-208ENST00000634934 ARRDC5A6NEK1 342 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 A8MVM7 634 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 ZNF208O43345 1280 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 RGS10O43665 173 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 OCM2P0CE71 109 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 OCMP0CE72 109 aaPredicted RBP13□□□□□ -0.33
LINC00339-208ENST00000634934 BMP7P18075 431 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 RBM34P42696 430 aaKnown RBP13□□□□□ -0.33
LINC00339-208ENST00000634934 UGT2B15P54855 530 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 MLLT10P55197 1068 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 RAC1P63000 192 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 HSF1Q00613 529 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 LAPTM4AQ15012 233 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 SEC23BQ15437 767 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 SYT14P1Q58G82 188 aa13□□□□□ -0.33
LINC00339-208ENST00000634934 LINC00114Q6XXX2 140 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms