RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 CDHR3Q6ZTQ4 885 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 KCMF1Q9P0J7 381 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 CRYM-AS1A6NIL9 109 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 METTL15A6NJ78 407 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 ARHGAP33O14559 1287 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 GLYR1Q49A26 553 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 SHEQ5VZ18 495 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 KCNG3Q8TAE7 436 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 NSUN5Q96P11 429 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 SGPP1Q9BX95 441 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 ULBP3Q9BZM4 244 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 MYEF2Q9P2K5 600 aaKnown RBP12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 PSAT1Q9Y617 370 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 CTRB1P17538 263 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 DMWDQ09019 674 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 CTRB2Q6GPI1 263 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 RASD1Q9Y272 281 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 SDHDO14521 159 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 FBXW5Q969U6 566 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 ZNF566Q969W8 418 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 SMIM3Q9BZL3 60 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 VSX1Q9NZR4 365 aaPredicted RBP12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 NUDT19A8MXV4 375 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 STT3AP46977 705 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 FJX1Q86VR8 437 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 WDR5BQ86VZ2 330 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 PQLC3Q8N755 202 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 C4orf36Q96KX1 117 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 SMOQ99835 787 aa12.32□□□□□ -0.44
SYNGAP1-208ENST00000629380 ZNF728P0DKX0 622 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 OR10K2Q6IF99 312 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 TMEM239Q8WW34 195 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 FBXL4Q9UKA2 621 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 HMGCLP35914 325 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 NSA2O95478 260 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 GJA5P36382 358 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 C6orf89Q6UWU4 347 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 OR4Q3Q8NH05 313 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 TMEM163Q8TC26 289 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 PEBP4Q96S96 227 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 GSTP1P09211 210 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 DPP4P27487 766 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 CD163Q86VB7 1156 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 DTX3Q8N9I9 347 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 A0A1W2PQ09 198 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 TCEAL1Q15170 157 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 APOOLQ6UXV4 268 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 IGFN1Q86VF2 1251 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 BPIFA2Q96DR5 249 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 PUS1Q9Y606 427 aaKnown RBP eCLIP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 NPIPB15A6NHN6 443 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 SLC15A4Q8N697 577 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 MKRN2Q9H000 416 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 SLC22A11Q9NSA0 550 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 ALPK2Q86TB3 2170 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 C19orf35Q6ZS72 473 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 TCTN2Q96GX1 697 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 ZNF331Q9NQX6 463 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 CBLCQ9ULV8 474 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 NCBP2LA6PVI3 153 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 CFHP08603 1231 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 DBHP09172 617 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 BPIFB3P59826 476 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 RGNQ15493 299 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 FAM57BQ71RH2 274 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 RPS27LQ71UM5 84 aaKnown RBP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 GON7Q9BXV9 100 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 NMNAT1Q9HAN9 279 aaPredicted RBP12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 TRAPPC2LQ9UL33 140 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
SYNGAP1-208ENST00000629380 MRPL33O75394 65 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 HPNP05981 417 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 UBE2G1P62253 170 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 NLGN4YQ8NFZ3 816 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 STYXL1Q9Y6J8 313 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 LAMP1P11279 417 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 ETV1P50549 477 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 SELENOWP63302 87 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 UNC50Q53HI1 259 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 DESI1Q6ICB0 168 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 DLK2Q6UY11 383 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 SALL4Q9UJQ4 1053 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 RNF225M0QZC1 329 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 SQSTM1Q13501 440 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 PCNX2A6NKB5 2137 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 SSR4P51571 173 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 MTCP1P56278 107 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 SEC61A1P61619 476 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 SLC35A2P78381 396 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 VEZF1Q14119 521 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 OR4D1Q15615 310 aa12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 UTP23Q9BRU9 249 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 EXOSC3Q9NQT5 275 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-208ENST00000629380 NECAP2Q9NVZ3 263 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms