RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 DOCK7Q96N67 2140 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 A0A1W2PRQ8 180 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 NKX2-6A6NCS4 301 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 ENO4A6NNW6 628 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 HSPB2A8KAH6 182 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 SMAD9O15198 467 aaKnown RBP13.13□□□□□ -0.31
PNKP-221ENST00000627317 GADD45GO95257 159 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 TMIGD3P0DMS9 266 aaPredicted RBP13.13□□□□□ -0.31
PNKP-221ENST00000627317 NQO1P15559 274 aaKnown RBP13.13□□□□□ -0.31
PNKP-221ENST00000627317 UGT2B15P54855 530 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 DGCR6Q14129 220 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 MFSD13AQ14CX5 517 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 RNPS1Q15287 305 aaKnown RBP13.13□□□□□ -0.31
PNKP-221ENST00000627317 HSPB2Q16082 182 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 IQCCQ4KMZ1 466 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 GTF2IRD2BQ6EKJ0 949 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 PAQR6Q6TCH4 344 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 RRM2BQ7LG56 351 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 GTF2IRD2Q86UP8 949 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 LIX1LQ8IVB5 337 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 NAXEQ8NCW5 288 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 OR6S1Q8NH40 331 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 PIGXQ8TBF5 258 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 ABHD3Q8WU67 409 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 ACOT11Q8WXI4 607 aaPredicted RBP13.13□□□□□ -0.31
PNKP-221ENST00000627317 INTS12Q96CB8 462 aaKnown RBP13.13□□□□□ -0.31
PNKP-221ENST00000627317 DHRS1Q96LJ7 313 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 CHID1Q9BWS9 393 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 ASPNQ9BXN1 380 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 UCK2Q9BZX2 261 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 YY1AP1Q9H869 796 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 RNF122Q9H9V4 155 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
PNKP-221ENST00000627317 POLQO75417 2590 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 FAM90A27PA6NNH2 459 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 CYTIPO60759 359 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 AKR7A3O95154 331 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 RCBTB2O95199 551 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 MT-ATP6P00846 226 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 BGLAPP02818 100 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 COX6B1P14854 86 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 KLK2P20151 261 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 FUT4P22083 530 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 CBLP22681 906 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 GRPRP30550 384 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 RRM2P31350 389 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 CEACAM8P31997 349 aaPredicted RBP13.12□□□□□ -0.31
PNKP-221ENST00000627317 AGFG1P52594 562 aaKnown RBP13.12□□□□□ -0.31
PNKP-221ENST00000627317 CTBP2P56545 445 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 CCNIQ14094 377 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 OTUD3Q5T2D3 398 aaPredicted RBP13.12□□□□□ -0.31
PNKP-221ENST00000627317 ABLIM2Q6H8Q1 611 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 OR52J3Q8NH60 311 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 PFN4Q8NHR9 129 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 SGTBQ96EQ0 304 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 MEPEQ9NQ76 525 aaPredicted RBP13.12□□□□□ -0.31
PNKP-221ENST00000627317 GLRX2Q9NS18 164 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 TMCC3Q9ULS5 477 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 CLEC4AQ9UMR7 237 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 CORINQ9Y5Q5 1042 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 MED12LQ86YW9 2145 aa13.12□□□□□ -0.31
PNKP-221ENST00000627317 A0A087WUU8 490 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 AQP7P3A6NL99 342 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 LRRN3E7EW58 273 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 M0R082 166 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 PIP5K1CO60331 668 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 FKBP6O75344 327 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 CH25HO95992 272 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 CRHP06850 196 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 CTSSP25774 331 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 SIRPAP78324 504 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 IL1RL1Q01638 556 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 RASGEF1BQ0VAM2 473 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 KPNB1Q14974 876 aaKnown RBP13.11□□□□□ -0.31
PNKP-221ENST00000627317 ZNF74Q16587 644 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 OR2T5Q6IEZ7 315 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 PODNL1Q6PEZ8 512 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 MBOAT2Q6ZWT7 520 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 TMEM99Q8N816 258 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 OR2T29Q8NH02 315 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 ZNF417Q8TAU3 575 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 GMPPAQ96IJ6 420 aaPredicted RBP13.11□□□□□ -0.31
PNKP-221ENST00000627317 MOGAT1Q96PD6 335 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 ZNF587Q96SQ5 575 aaPredicted RBP13.11□□□□□ -0.31
PNKP-221ENST00000627317 TACO1Q9BSH4 297 aaKnown RBP13.11□□□□□ -0.31
PNKP-221ENST00000627317 SFXN3Q9BWM7 321 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 REEP1Q9H902 201 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 FKRPQ9H9S5 495 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 KRCC1Q9NPI7 259 aaPredicted RBP13.11□□□□□ -0.31
PNKP-221ENST00000627317 NANSQ9NR45 359 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 CCM2LQ9NUG4 571 aaPredicted RBP13.11□□□□□ -0.31
PNKP-221ENST00000627317 EMC3Q9P0I2 261 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 KLHL13Q9P2N7 655 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 TMEM5Q9Y2B1 443 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 EMC9Q9Y3B6 208 aa13.11□□□□□ -0.31
PNKP-221ENST00000627317 PKDREJQ9NTG1 2253 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms