RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 MTFP1Q9UDX5 166 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SERTAD3Q9UJW9 196 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 GPR34Q9UPC5 381 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 V9GY05 133 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TRANK1O15050 2925 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TRPM6Q9BX84 2022 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 FXYD6-FXYD2A0A087WZ82 144 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TBC1D3KA0A087X1G2 549 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TRAV14DV4A0A0A6YYC5 116 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 KANTRA0A1W2PQU2 76 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RNF222A6NCQ9 220 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TBC1D3BA6NDS4 549 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TBC1D3FA6NER0 549 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 FAM183AA6NL82 134 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 DISC1C4P0D8 188 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SULT1C2O00338 296 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RTCAO00442 366 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 NDUFS4O43181 175 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 XRCC3O43542 346 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PIP5K1CO60331 668 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 GLSO94925 669 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LYPD3O95274 346 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PAK4O96013 591 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RLN2P04090 185 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 S100A6P06703 90 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CKMP06732 381 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CSF1P09603 554 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF35P13682 527 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 EPCAMP16422 314 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CSNK2A2P19784 350 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PAX6P26367 422 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CFPP27918 469 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 NOS3P29474 1203 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PYCR1P32322 319 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CSF2RBP32927 897 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TSFMP43897 325 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 STARP49675 285 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 NCBP2P52298 156 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 H2BFSP57053 126 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TAS2R20P59543 309 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 STXBP1P61764 594 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ERVK-25P63136 954 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CXADRP78310 365 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 DUSP8Q13202 625 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LASP1Q14847 261 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZIC1Q15915 447 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 NDUFAF6Q330K2 333 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ARHGAP11BQ3KRB8 267 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TMEM35AQ53FP2 167 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 EIPR1Q53HC9 387 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PAN3Q58A45 887 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SLC35D3Q5M8T2 416 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TBC1D3GQ6DHY5 549 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ELP2Q6IA86 826 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OR7E24Q6IFN5 339 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 FAM180BQ6P0A1 224 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 HAGHLQ6PII5 290 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF813Q6ZN06 617 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF765Q7L2R6 523 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 FCRLAQ7L513 359 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 UBE3DQ7Z6J8 389 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 MEX3DQ86XN8 651 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LDLRAD3Q86YD5 345 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 NUP43Q8NFH3 380 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OR2L2Q8NH16 312 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OR5J2Q8NH18 312 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OR6S1Q8NH40 331 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 C1orf216Q8TAB5 229 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SYNPRQ8TBG9 265 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PHOSPHO2Q8TCD6 241 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CCDC107Q8WV48 283 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZFPM2Q8WW38 1151 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PMM1Q92871 262 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OTUB2Q96DC9 234 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PELI1Q96FA3 418 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 WDR89Q96FK6 387 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 LRIG1Q96JA1 1093 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TBX5Q99593 518 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 TSNAXQ99598 290 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 GFI1Q99684 422 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ORAI3Q9BRQ5 295 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 GINS4Q9BRT9 223 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PDCD10Q9BUL8 212 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ACTRT3Q9BYD9 372 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PBX4Q9BYU1 374 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 FXYD6Q9H0Q3 95 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 RNF122Q9H9V4 155 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 POLMQ9NP87 494 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZFP57Q9NU63 452 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 MRPL15Q9P015 296 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 MBD2Q9UBB5 411 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 UPB1Q9UBR1 384 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 KLK11Q9UBX7 282 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 OR5V1Q9UGF6 321 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CES1P1Q9UKY3 287 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CLEC4EQ9ULY5 219 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 CLEC4AQ9UMR7 237 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 SIGLEC7Q9Y286 467 aa3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 ZNF443Q9Y2A4 671 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-205ENST00000626021 PLEKHA6Q9Y2H5 1048 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms