RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 SEMA4CQ9C0C4 833 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 NXF5Q9H1B4 397 aaKnown RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 FN3KQ9H479 309 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 PAQR5Q9NXK6 330 aaPredicted RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 KCNE5Q9UJ90 142 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 PTRH2Q9Y3E5 179 aaKnown RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 PEX12O00623 359 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 SOCS6O14544 535 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 LYRM1O43325 122 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 NCR1O76036 304 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 NID1P14543 1247 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 ZNF24P17028 368 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 MTNR1BP49286 362 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 RNF144AP50876 292 aaPredicted RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 CLDN20P56880 219 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 IL18Q14116 193 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 P2RY14Q15391 338 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.82□□□□□ -0.2
ATRX-211ENST00000623321 YIF1BQ5BJH7 314 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 NIPAL3Q6P499 406 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 TRILQ7L0X0 811 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 ASCL5Q7RTU5 278 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 TIPARPQ7Z3E1 657 aaKnown RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 OR2Y1Q8NGV0 311 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 UBASH3BQ8TF42 649 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 SAMD8Q96LT4 415 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 FYTTD1Q96QD9 318 aaKnown RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 UBL7Q96S82 380 aaPredicted RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 MESP1Q9BRJ9 268 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 WWTR1Q9GZV5 400 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 UBQLN3Q9H347 655 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 H2AFY2Q9P0M6 372 aaPredicted RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 MRTO4Q9UKD2 239 aaKnown RBP13.82□□□□□ -0.2
ATRX-211ENST00000623321 SLC7A7Q9UM01 511 aa13.82□□□□□ -0.2
ATRX-211ENST00000623321 EP300Q09472 2414 aaPredicted RBP13.81□□□□□ -0.2
ATRX-211ENST00000623321 LOC102723996A0A087X1L8 192 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 NPIPA5A0A0B4J1W7 369 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 CENPVL1A0A0U1RR11 272 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 ANKRD34BA5PLL1 514 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 FAM25AB3EWG3 89 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 FAM25CB3EWG5 89 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 FAM25GB3EWG6 89 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 NPIPA7E9PJI5 369 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 GTPBP1O00178 669 aaKnown RBP13.81□□□□□ -0.2
ATRX-211ENST00000623321 CDC42EP2O14613 210 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 RNF13O43567 381 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 SLC2A10O95528 541 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 UMODP07911 640 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 NPIPA8P0DM63 369 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 ZNF136P52737 540 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 EEF1A1P68104 462 aaKnown RBP13.81□□□□□ -0.2
ATRX-211ENST00000623321 TATDN3Q17R31 274 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 UTS2BQ765I0 119 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 KLBQ86Z14 1044 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 CPOQ8IVL8 374 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 APCDD1LQ8NCL9 501 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 C17orf47Q8NEP4 570 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 OTULINQ96BN8 352 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 C8orf44Q96CB5 159 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 GAL3ST4Q96RP7 486 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 TRAF4Q9BUZ4 470 aaPredicted RBP13.81□□□□□ -0.2
ATRX-211ENST00000623321 KCNN2Q9H2S1 579 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 MALT1Q9UDY8 824 aa13.81□□□□□ -0.2
ATRX-211ENST00000623321 ZNF223Q9UK11 482 aaPredicted RBP13.81□□□□□ -0.2
ATRX-211ENST00000623321 UNC119BA6NIH7 251 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 CD8B2A6NJW9 211 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 A6NL46 340 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 TO15178 435 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 PRKNO60260 465 aaPredicted RBP13.8□□□□□ -0.2
ATRX-211ENST00000623321 IL33O95760 270 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 CD8BP10966 210 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 TCN2P20062 427 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 ATP6V1E1P36543 226 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 PSMD4P55036 377 aaKnown RBP13.8□□□□□ -0.2
ATRX-211ENST00000623321 SMARCD3Q6STE5 483 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 RANBP3LQ86VV4 465 aaPredicted RBP13.8□□□□□ -0.2
ATRX-211ENST00000623321 TMPRSS12Q86WS5 348 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 NLGN4YQ8NFZ3 816 aaPredicted RBP13.8□□□□□ -0.2
ATRX-211ENST00000623321 PRSS27Q9BQR3 290 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 B3GNT4Q9C0J1 378 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 FOXJ2Q9P0K8 574 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 ALG5Q9Y673 324 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 TRAPPC13A5PLN9 417 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 NPIPB9F8W1W9 429 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 TM4SF5O14894 197 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 SLC43A1O75387 559 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 TNFSF15O95150 251 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 RAB40ALP0C0E4 278 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 PSKH1P11801 424 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 CD53P19397 219 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 ERP29P30040 261 aaKnown RBP13.8□□□□□ -0.2
ATRX-211ENST00000623321 FOLR3P41439 243 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 NR0B1P51843 470 aaKnown RBP13.8□□□□□ -0.2
ATRX-211ENST00000623321 ATP12AP54707 1039 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 SLC26A5P58743 744 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 RNF4P78317 190 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 CD83Q01151 205 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 MADCAM1Q13477 382 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 ZNF141Q15928 474 aa13.8□□□□□ -0.2
ATRX-211ENST00000623321 FAM69BQ5VUD6 431 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms