RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CRTC2Q53ET0 693 aaPredicted RBP14.85□□□□□ -0.03
LDB3-208ENST00000623007 SLC25A53Q5H9E4 307 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 FAM122BQ7Z309 247 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 SCAIQ8N9R8 606 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 ZNF248Q8NDW4 579 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 SDR9C7Q8NEX9 313 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 FNDC8Q8TC99 324 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 TM9SF4Q92544 642 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 DDIT4LQ96D03 193 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 KTI12Q96EK9 354 aaPredicted RBP14.85□□□□□ -0.03
LDB3-208ENST00000623007 DDOQ99489 341 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 CDADC1Q9BWV3 514 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 C6orf62Q9GZU0 229 aaPredicted RBP14.85□□□□□ -0.03
LDB3-208ENST00000623007 PADI1Q9ULC6 663 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 YARS2Q9Y2Z4 477 aaKnown RBP14.85□□□□□ -0.03
LDB3-208ENST00000623007 PMF1-BGLAPU3KQ54 211 aa14.85□□□□□ -0.03
LDB3-208ENST00000623007 NPIPB13A6NJU9 1138 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 HSPB2A8KAH6 182 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 NPIPB4C9JG80 1138 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 WWP2O00308 870 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 PHYHO14832 338 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 APOL3O95236 402 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 SERPINA3P01011 423 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 AQP2P41181 271 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 FBXW4P57775 412 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 RPS3AP61247 264 aaKnown RBP14.84□□□□□ -0.03
LDB3-208ENST00000623007 RPL18Q07020 188 aaKnown RBP14.84□□□□□ -0.03
LDB3-208ENST00000623007 HSPB2Q16082 182 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 INAQ16352 499 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 LPAL2Q16609 132 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 SPANXN2Q5MJ10 180 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 TMEM164Q5U3C3 297 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 C1orf140Q5VVS0 124 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 FAM205BPQ63HN1 556 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 SHFQ7M4L6 423 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 HCAR1Q9BXC0 346 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 POTEKPQ9BYX7 375 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 PTGES2Q9H7Z7 377 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 METTL7AQ9H8H3 244 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 MED20Q9H944 212 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 MRPL39Q9NYK5 338 aaKnown RBP14.84□□□□□ -0.03
LDB3-208ENST00000623007 LOXL2Q9Y4K0 774 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 PCDHGA1Q9Y5H4 931 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 EXPH5Q8NEV8 1989 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 ISPDA4D126 451 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 TMEM200CA6NKL6 621 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 XKRYO14609 159 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 PLPP2O43688 288 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 IGHMP01871 453 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 ZNF806P0C7X5 589 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 CCL4P13236 92 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 SPI1P17947 270 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 CELP19835 753 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 ADH6P28332 368 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 GTF2E2P29084 291 aaKnown RBP14.84□□□□□ -0.03
LDB3-208ENST00000623007 EIF1P41567 113 aaKnown RBP14.84□□□□□ -0.03
LDB3-208ENST00000623007 RPS5P46782 204 aaKnown RBP14.84□□□□□ -0.03
LDB3-208ENST00000623007 KRR1Q13601 381 aaKnown RBP14.84□□□□□ -0.03
LDB3-208ENST00000623007 RGS21Q2M5E4 152 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 NDUFAF7Q7L592 441 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 ADGRG3Q86Y34 549 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 ARMC10Q8N2F6 343 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 CYB561A3Q8NBI2 242 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 MFSD8Q8NHS3 518 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 TAAR8Q969N4 342 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 SLC25A46Q96AG3 418 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 CEP19Q96LK0 163 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 IMMP1LQ96LU5 166 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 MOGAT1Q96PD6 335 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 RTN4RQ9BZR6 473 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 INIPQ9NRY2 104 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 WIF1Q9Y5W5 379 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 TMEM14AQ9Y6G1 99 aa14.84□□□□□ -0.03
LDB3-208ENST00000623007 MUC3AQ02505 3323 aa14.83□□□□□ -0.03
LDB3-208ENST00000623007 A0A087WZY1 265 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 LOC110117498-PIK3R3F6TDL0 507 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 KLF7O75840 302 aaPredicted RBP14.83□□□□□ -0.04
LDB3-208ENST00000623007 DXOO77932 396 aaKnown RBP14.83□□□□□ -0.04
LDB3-208ENST00000623007 ZNF28P17035 718 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 PRKCAP17252 672 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 GBX2P52951 348 aaPredicted RBP14.83□□□□□ -0.04
LDB3-208ENST00000623007 ERVK-25P63136 954 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 ZNF791Q3KP31 576 aaPredicted RBP14.83□□□□□ -0.04
LDB3-208ENST00000623007 LEG1Q6P5S2 330 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 C6orf15Q6UXA7 325 aaPredicted RBP14.83□□□□□ -0.04
LDB3-208ENST00000623007 VASH1Q7L8A9 365 aaPredicted RBP14.83□□□□□ -0.04
LDB3-208ENST00000623007 KLBQ86Z14 1044 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 NAXDQ8IW45 347 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 SLC35F2Q8IXU6 374 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 CACTIN-AS1Q8N1I8 211 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 LSM14AQ8ND56 463 aaKnown RBP14.83□□□□□ -0.04
LDB3-208ENST00000623007 MOSPD2Q8NHP6 518 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 SLC25A43Q8WUT9 341 aaPredicted RBP14.83□□□□□ -0.04
LDB3-208ENST00000623007 PHYHIPQ92561 330 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 NMNAT3Q96T66 252 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 B3GNT4Q9C0J1 378 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 KLHL1Q9NR64 748 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 GALNT8Q9NY28 637 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 ADAM18Q9Y3Q7 739 aa14.83□□□□□ -0.04
LDB3-208ENST00000623007 UGT2A1Q9Y4X1 527 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms